G537473 (crld2)


Basic Information

Item Value
gene id G537473
gene name crld2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67579716 ~ 67583897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608528
GTGTGGCTCCAATTCAAGGCAGCCTGTTGCTTATGACATCCTACAGTAAGAGTAGCGTAATCACAGTGGTCGTACCTGGAAACATGACTCAAACACTGGCTCATTGTTAACCATGCTGTTATAGTGACTGACTGATCTTTCCAACAACCACTATTGACTACTGTGCTGGGCCTGACGGCTTTGTTATTAATTCATTAGTGGAGAGGCCTTGAAGGCCTGCCAATCTCAGTAATCACAGGATGATGCCCGTCCCATTGGCATCAGATTGGCTGCAATTATCTGCAGAGGGAAGCACTGAGTCAGCCGCCGACAGCTTTTCCATCCCCGGGTAAATGGATAGGCTGTGATTATTTCCTCCTTATTAAAGAACAATCCACCCAACCAGCTACATGTACTTCCTAACAGCTGGGTCATCACTTGGACAGAACCTCTGGATCAGTCTCTATCACACCGGGAGCTGACTGTTGATGGCCATGGTTGTAATACCATACTGTTCCCTGTCACTGACAGCCCATTCCTCACTCACACTAAGGTTAAGGTGAGGCTCCCAGTGAGGGGGCCCTTGATTTCAGCATTAGATTTCACTGTACTCTAGCTCAGCTGATTTAGGCCATGCAGCACTTTGCACACTCCATTGAATGTCCGGGTAAAGTAAGCAAAGGATTCATGTGTGGGCCGTCCGCACACCAAACCACACCATTACTCTTGCACCCCTGTGTGCCAAACATGGACTTGGCGCCAATGTTTTCCGTGTGCGAGGGAAGGGTGTGCGAGGGAAGGGTATTTTacaggggaagaggagggtagagcaGGCACCCACCTCTCTGACTGGATGCCGTTCTTCAGGACACCAACGTAACTCCTCTTCTTATCCAGGGCCAGGACGTCCACGTAGCCTCCACCGGCTTGGATCACCCCGGCATGGATGGCTGCCCGGCAGATACTGGAGCGCTCTGTGTAGAAGCTGTTCCCAACCACCGGAGCCCAGTAGGATGGCTCATTCTTGCAGTTGGCCGGACAGAACACTCTTGGGCAGTTGGAGTAGGGCTTCTTGAAGGGGCAGATCTCCGCCACTGTTGCATAGCAGTCCACTGATTGTCTTTCCACTTTGGACACCACAAATGCATTGCCGGCTTTGTATTTACTGAATGACTCAATGCCGTTCTTTGTTGCCTTGACGAAGAATGGCAACTTGTCTTTCCTCGTAGTGTCCACCAGACCACCATTGTTATTGATGATGCCATAGTGCATAGCAGCACGACAGATACTTGATTGCACATCATAGAAGAGCGTCCCCCACACTTTCCCTTTCTTGTTCTGGCAGTTAGCAGGGCAGTTGAATCTGTTGCAGGTTGCTCCCTTGCACTTGTCACGCATTTTGGTCTCACATTTGATGTTTTGGGCCAGGAAAGTGCTGGTGGGAGCCTTGGGAGTAGAAGGCTTGGGAGTGGAGGGCTTCTTGGGAGCAGCAGGCTTGGGTTGGGGTCTGTGGACAGGCTTGGTGGTGGTGCGGGGTGACATGGGAATCTGAGCTTTCTCCACTTCGTTCATGTCCTCAGTCTCAGAACGCTGAGAGTCCCCCTTGAAGCAGAGGTTGTCCCTGCAGCTTCCTCCATAGCTAGGAGGGCACTGGGAGCATGGGCGGCCATGTTGGTAAGGGGCCTCTCCGATCCAGTTTCCcctggggaggaggaaggagcacAGTGGTCAGGATGACTGGCTGGAAACTAATCAGCACTCAGCCGTCACGGCACATGGCCTAGTAATTATTCACGTGTTCTTTGCACATTATCACACACTCTTAAAACCTTGAGTCCAGC

Function

NR:

description
cysteine-rich secretory protein LCCL domain-containing 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608528 True 1820 lncRNA 0.52 7 67579716 67583897

Neighbor

gene id symbol gene type direction distance location
LOC110526401 LOC106587347 coding upstream 34860 67528142 ~ 67544856 (+)
LOC110526948 LOC106562086 coding upstream 803384 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 826276 66748816 ~ 66753440 (+)
LOC110526947 LOC105029748 coding upstream 859275 66719808 ~ 66720441 (+)
LOC110526392 LOC106587181 coding upstream 932293 66609230 ~ 66647423 (+)
LOC110526949 mald3 coding downstream 59917 67643814 ~ 67644573 (+)
LOC110526406 LOC106587353 coding downstream 152913 67736810 ~ 67753397 (+)
LOC110526410 myo1e coding downstream 265377 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 375917 67959814 ~ 67973591 (+)
adam10a adam10 coding downstream 423131 68007028 ~ 68116406 (+)
G537470 NA non-coding upstream 2327 67577077 ~ 67577389 (+)
G537448 NA non-coding upstream 63294 67516177 ~ 67516422 (+)
G537447 NA non-coding upstream 63636 67515796 ~ 67516080 (+)
G537423 NA non-coding upstream 88841 67490629 ~ 67490875 (+)
G537399 NA non-coding upstream 121383 67458044 ~ 67458333 (+)
G537528 NA non-coding downstream 15844 67599741 ~ 67600186 (+)
G537529 NA non-coding downstream 16664 67600561 ~ 67631667 (+)
G537533 NA non-coding downstream 23357 67607254 ~ 67634590 (+)
G537589 NA non-coding downstream 119618 67703515 ~ 67708720 (+)
G537612 LOC100194703 non-coding downstream 165725 67749622 ~ 67749878 (+)
G537032 LOC106587324 other upstream 469088 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 474808 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 561063 67013220 ~ 67018653 (+)
G536406 NA other upstream 975663 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1730275 65847623 ~ 65849441 (+)
G537606 NA other downstream 170659 67754556 ~ 67756618 (+)
G537617 atxn1l other downstream 182859 67766756 ~ 67767613 (+)
LOC110526436 LOC107688027 other downstream 1095480 68679317 ~ 68681675 (+)
G538561 NA other downstream 1120501 68704398 ~ 68704696 (+)
G538607 NA other downstream 1227222 68811119 ~ 68811890 (+)

Expression


Co-expression Network