G537612 (LOC100194703)


Basic Information

Item Value
gene id G537612
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67749622 ~ 67749878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608678
gggcaacaccagtacagagcttgctcaggaatggcagcaggcaggtgtgagtgcatctgcacgcgcatctacacgcacagtgaggcgaagactttcgGAGGATGGTCTAATGTCaaaaagggcagcaaagaagccacttctctccaggaaagacatcagggacagactgatattctgcaaaaggtacagggattggactgctgaggactggggtaaagtaattttctctgatgaacctcctttccaattgtttgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608678 True 257 lncRNA 0.50 1 67749622 67749878

Neighbor

gene id symbol gene type direction distance location
LOC110526949 mald3 coding upstream 105049 67643814 ~ 67644573 (+)
LOC110526401 LOC106587347 coding upstream 204766 67528142 ~ 67544856 (+)
LOC110526948 LOC106562086 coding upstream 973290 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 996182 66748816 ~ 66753440 (+)
LOC110526947 LOC105029748 coding upstream 1029181 66719808 ~ 66720441 (+)
LOC110526410 myo1e coding downstream 99396 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 209936 67959814 ~ 67973591 (+)
adam10a adam10 coding downstream 257150 68007028 ~ 68116406 (+)
LOC118965064 LOC106577244 coding downstream 310758 68060636 ~ 68063992 (+)
trnar-acg-5 NA coding downstream 369952 68119826 ~ 68130306 (+)
G537589 NA non-coding upstream 40902 67703515 ~ 67708720 (+)
G537533 NA non-coding upstream 115032 67607254 ~ 67634590 (+)
G537529 NA non-coding upstream 117955 67600561 ~ 67631667 (+)
G537528 NA non-coding upstream 149436 67599741 ~ 67600186 (+)
G537473 crld2 non-coding upstream 165725 67579716 ~ 67583897 (+)
G537615 NA non-coding downstream 7247 67757125 ~ 67762036 (+)
G537630 NA non-coding downstream 44061 67793939 ~ 67803569 (+)
G537632 LOC106587318 non-coding downstream 46197 67796075 ~ 67824783 (+)
G537635 NA non-coding downstream 63165 67813043 ~ 67830909 (+)
G537636 NA non-coding downstream 63507 67813385 ~ 67821093 (+)
G537032 LOC106587324 other upstream 638994 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 644714 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 730969 67013220 ~ 67018653 (+)
G536406 NA other upstream 1145569 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1900181 65847623 ~ 65849441 (+)
G537606 NA other downstream 4678 67754556 ~ 67756618 (+)
G537617 atxn1l other downstream 16878 67766756 ~ 67767613 (+)
LOC110526436 LOC107688027 other downstream 929499 68679317 ~ 68681675 (+)
G538561 NA other downstream 954520 68704398 ~ 68704696 (+)
G538607 NA other downstream 1061241 68811119 ~ 68811890 (+)

Expression


Co-expression Network