G537606


Basic Information

Item Value
gene id G537606
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67754556 ~ 67756618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608672
tggcatcatgaggaaggaaaatgttgcttcaatatatccacatctcaagacatcagtcaggaagttaaagcttggtggcaaatgggtcttccaaatggacaatgaccccaagcatactaacaaagttgtggcaaaatggcttaaggacaacaaagtcaatgtattggagtggccatcacaaagccctgacctcaatcctatagaatatttgtgggcagaactgaaaaggcgtgtgcgagcaaggaggcctacaaacctgactcagttacaccagctctgtcaggaggaatgggccaaaattcacccaacttatttggggaagcttgtggaaggctacccgaaacgtttgacccaagttaaacaatttaaaggcaatgctaccaaatactgagtgcatgtaaacgtctaacccactgggaatgtgatgaaataaataaaagctgaaataaatcattccctctattattctgacatttcacattcaaatAAAATTGATCTTAACTGGcttaagacagggattttttactaggattaaatgtcaggaattgtgaagcactgagtttaaatgtttttggataaggtgtatgtaaacttccgacttcaactgcttGTGTCAGGGTATATCAGCTATATTTTGAATAACTAATCTTTGCATTTTTCCAGTGATCTCACTTTGCAGAGTTCCACTCTCCAATGAGCATGTTCTAGACTCATTATTAAACCTGTTGACCCTCGCCCAGTTGGGAGAGATCTCTGGTCTTATCTGTTTCATTGACCTCATTCCAATTGATATTTATGCAACATGTGAATATATATTTTGTAAAGAAAGTTGGGGATATTTTTTTGGTTTGTTATATAATAGATGAaagtacacattttgccatgtttggttctatactgtatgtatttttttccctTCTCTTTGGTCATATGTTCTCAATTACTTGCCACAAAGGTTACCTCCGATACACAATGTTTCACAACTGAGCTCTGCAGACACATATTGACAATGTTACAGTACATGATTCGTTTTCTGGAGTAGTCCTTAAGATAGGAACTAAGCCGGTTCTCAGTTTGAGCCACTACCAGGCTAAAGCCCAGAACAGAATAGCATCCCGCTCAACAGGGGAAAAAGCTATTATATTCTAATTGTCCTTAAGTCTAGGAGTGGTTCAAACCTCTATGCAACAATGCTGTTTATTCCAAGGGAAATTTGACTCTTAAAACTATGCAGATTGCAGTAAAAAACAAATGGACTCAAATGTATGGAATTGTGCAACTCAGGCGATGCAACTCAGCGAGACCTCTTTGGCCATAGATTCAGCGCCCTGGTCCATGAACTTCTTTTCAGCAGGGTCATATCACTATCCTAATTTAAGATACACAGAGAGCAGAGCCATGCTGCAGACAGTGTTGTCACACACGGTCATTATCTTTGCTATAAAATCTGTAACAACATTTCTGCCAAGTACTGAACAATAATGAATACTGGGTATTCTGACTGATTTGAACTGGCAGCTGATATTAGTGTCATCATCCTTACACAGTGGAATAATGCAATGGAAAATGTGGAGTACGCTCTTCTTTGACATTAAAATACTACAAAAGGAAATTGTAGACAGTTTCCCAGGTTCTGTTTGTGCTTTTGAACAGCACTGTCTAAAGCTCTGCCTAGCGTGACAGTCTGGATTAGGTTAACACTGCATGTCGTGAAACTGCATATGTTCTAGAATGGTTCAATATGAACTTgtattctactgttattctatgCCTGCCTGTTTTTGTTCAATTTAATCAAAAGATGTTCTTTGAACTTTGGCCTTTTTACTAGTCTATCAGGATATTCTCTTGATGTCCATGTTTACAAAGGAAATCATTTTAAGAAGGCCAAAATCAATGAGggtaaacaaaagtgaaaaacagaaacaCTTTACGCTCGTTCTGTTGTCACTGCTCAGAACGGTACTTTTACGGCAGCCATTCTGCTACTGGATTAACAGATGTACAGATCATGTTAAAAGCAGGAATAgaatgaaataaataaacattgacTTTGACACCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608672 True 2063 TUCP 0.39 1 67754556 67756618

Neighbor

gene id symbol gene type direction distance location
LOC110526406 LOC106587353 coding upstream 1159 67736810 ~ 67753397 (+)
LOC110526949 mald3 coding upstream 109983 67643814 ~ 67644573 (+)
LOC110526401 LOC106587347 coding upstream 209700 67528142 ~ 67544856 (+)
LOC110526948 LOC106562086 coding upstream 978224 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 1001116 66748816 ~ 66753440 (+)
LOC110526410 myo1e coding downstream 92656 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 203196 67959814 ~ 67973591 (+)
adam10a adam10 coding downstream 250410 68007028 ~ 68116406 (+)
LOC118965064 LOC106577244 coding downstream 304018 68060636 ~ 68063992 (+)
trnar-acg-5 NA coding downstream 363212 68119826 ~ 68130306 (+)
G537612 LOC100194703 non-coding upstream 4678 67749622 ~ 67749878 (+)
G537589 NA non-coding upstream 45836 67703515 ~ 67708720 (+)
G537533 NA non-coding upstream 119966 67607254 ~ 67634590 (+)
G537529 NA non-coding upstream 122889 67600561 ~ 67631667 (+)
G537528 NA non-coding upstream 154370 67599741 ~ 67600186 (+)
G537615 NA non-coding downstream 507 67757125 ~ 67762036 (+)
G537630 NA non-coding downstream 37321 67793939 ~ 67803569 (+)
G537632 LOC106587318 non-coding downstream 39457 67796075 ~ 67824783 (+)
G537635 NA non-coding downstream 56425 67813043 ~ 67830909 (+)
G537636 NA non-coding downstream 56767 67813385 ~ 67821093 (+)
G537032 LOC106587324 other upstream 643928 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 649648 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 735903 67013220 ~ 67018653 (+)
G536406 NA other upstream 1150503 66602785 ~ 66604053 (+)
G535150 LOC106587155 other upstream 1905115 65847623 ~ 65849441 (+)
G537617 atxn1l other downstream 10138 67766756 ~ 67767613 (+)
LOC110526436 LOC107688027 other downstream 922759 68679317 ~ 68681675 (+)
G538561 NA other downstream 947780 68704398 ~ 68704696 (+)
G538607 NA other downstream 1054501 68811119 ~ 68811890 (+)
G538859 NA other downstream 1149427 68906045 ~ 68906847 (+)

Expression


Co-expression Network