G537642


Basic Information

Item Value
gene id G537642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67835301 ~ 67835571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608724
TTCTTAGGTAGCGggatgacttttgcttccctccaagcctggGGGCACACacattctagtaggcttaaattgaaaatatggcaaataggagtggcaatattgtccactattatcctcagtaattttccatccaatttgTCAGACctcggtggcttgtcattgttgatagacaacaacaattttttcacctcttccacactcactttacggaattcaaaaccacaatgcttttctttcataatttggtcagatatacttggatgtgtagtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608724 True 271 lncRNA 0.39 1 67835301 67835571

Neighbor

gene id symbol gene type direction distance location
LOC110526406 LOC106587353 coding upstream 81904 67736810 ~ 67753397 (+)
LOC110526949 mald3 coding upstream 190728 67643814 ~ 67644573 (+)
LOC110526401 LOC106587347 coding upstream 290445 67528142 ~ 67544856 (+)
LOC110526948 LOC106562086 coding upstream 1058969 66756330 ~ 66776332 (+)
LOC110526393 LOC106587180 coding upstream 1081861 66748816 ~ 66753440 (+)
LOC110526410 myo1e coding downstream 13703 67849274 ~ 67897779 (+)
LOC110526412 LOC106587340 coding downstream 124243 67959814 ~ 67973591 (+)
adam10a adam10 coding downstream 171457 68007028 ~ 68116406 (+)
LOC118965064 LOC106577244 coding downstream 225065 68060636 ~ 68063992 (+)
trnar-acg-5 NA coding downstream 284259 68119826 ~ 68130306 (+)
G537640 NA non-coding upstream 1660 67833389 ~ 67833641 (+)
G537639 NA non-coding upstream 2559 67832504 ~ 67832742 (+)
G537638 NA non-coding upstream 3430 67831514 ~ 67831871 (+)
G537635 NA non-coding upstream 4392 67813043 ~ 67830909 (+)
G537632 LOC106587318 non-coding upstream 10518 67796075 ~ 67824783 (+)
G537654 LOC100136691 non-coding downstream 64229 67899800 ~ 67901041 (+)
G537699 rnf111 non-coding downstream 104984 67940555 ~ 67941516 (+)
G537720 NA non-coding downstream 135754 67971325 ~ 67972779 (+)
G537721 NA non-coding downstream 145995 67981566 ~ 67982894 (+)
G537802 NA non-coding downstream 273428 68108999 ~ 68109551 (+)
G537617 atxn1l other upstream 67688 67766756 ~ 67767613 (+)
G537606 NA other upstream 78683 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 724673 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 730393 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 816648 67013220 ~ 67018653 (+)
LOC110526436 LOC107688027 other downstream 843806 68679317 ~ 68681675 (+)
G538561 NA other downstream 868827 68704398 ~ 68704696 (+)
G538607 NA other downstream 975548 68811119 ~ 68811890 (+)
G538859 NA other downstream 1070474 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 1160512 68996083 ~ 69002828 (+)

Expression


Co-expression Network