G537654 (LOC100136691)



Basic Information


Item Value
gene id G537654
gene name LOC100136691
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 67899800 ~ 67901041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU608736
CTCAAGGCACTGCAAATATCCATAGATATCCTTTATATATTCAGAGCACAGTTGTGGCATGTCTGAATCCCCTTCATCAATGTCTTCTACAGCAAGTAGAGCTACTGAGAACGCCTGACACAATTCCTCTTCTTTCATGGACACGTTAGCAGACTCTTCAGGCTGAGGAACTGGGGAACGTTTAGTCCGAACAGCTGCTGGCTGGTCTTTTTGGTTCATAGATTGTTTGGTTGAAGCCTTAGCAGCAACAGTCTTCTTGGACGGCACCGCTTTGCTGGCATTGGGAAAGTTGGACAGCTCTCCAAGCACAGCCCTTCTTGCTCCAGCTACGTTTGCTTTTCCCATTAGTGCTGGGTTGTCTGCGTTCCTTAACTGTTTAAGACAAACGCAGCACGAACTTCCAATGACGACATCTTTACGCTTTGTTAAAAACAAGGCAGTTAGATAGCCAGCTATAATGGGCAAAACTCCGCTTTTAGTTCTGTTGTTTGCTCGCTATCTCCACTGACACAAGGCCCAAGTAAACAAGTCTCAACGAACAATTCCACAGTCATTCAAATACCACTCTGTTGATTCTAATTGGATACCGCTTCATAGAATGCACCTCTTTCATTGGTTGCCAAAGATGAATCACGAATGACGTCATACAATCAGAACGGATCtaatttcttttcttttttttcaaaaacaaatcAATACAGAAAGTACATGGGGGAACACAAGTATACATAAATAAGATACAAAGGACAATtgggctagggggtacaatatcacattacacaag

Function


NR:

description
cyclin B2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU608736 True 784 lncRNA 0.43 3 67899800 67901041

Neighbor


gene id symbol gene type direction distance location
LOC110526410 myo1e coding upstream 2021 67849274 ~ 67897779 (+)
LOC110526406 LOC106587353 coding upstream 146403 67736810 ~ 67753397 (+)
LOC110526949 mald3 coding upstream 255227 67643814 ~ 67644573 (+)
LOC110526401 LOC106587347 coding upstream 354944 67528142 ~ 67544856 (+)
LOC110526948 LOC106562086 coding upstream 1123468 66756330 ~ 66776332 (+)
LOC110526412 LOC106587340 coding downstream 58773 67959814 ~ 67973591 (+)
adam10a adam10 coding downstream 105987 68007028 ~ 68116406 (+)
LOC118965064 LOC106577244 coding downstream 159595 68060636 ~ 68063992 (+)
trnar-acg-5 NA coding downstream 218789 68119826 ~ 68130306 (+)
aldh1a2 LOC106587345 coding downstream 264008 68165049 ~ 68188551 (+)
G537642 NA non-coding upstream 64229 67835301 ~ 67835571 (+)
G537640 NA non-coding upstream 66159 67833389 ~ 67833641 (+)
G537639 NA non-coding upstream 67058 67832504 ~ 67832742 (+)
G537638 NA non-coding upstream 67929 67831514 ~ 67831871 (+)
G537635 NA non-coding upstream 68891 67813043 ~ 67830909 (+)
G537699 rnf111 non-coding downstream 39514 67940555 ~ 67941516 (+)
G537720 NA non-coding downstream 70284 67971325 ~ 67972779 (+)
G537721 NA non-coding downstream 80525 67981566 ~ 67982894 (+)
G537802 NA non-coding downstream 207958 68108999 ~ 68109551 (+)
G537744 NA non-coding downstream 216452 68117493 ~ 68117835 (+)
G537617 atxn1l other upstream 132187 67766756 ~ 67767613 (+)
G537606 NA other upstream 143182 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 789172 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 794892 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 881147 67013220 ~ 67018653 (+)
LOC110526436 LOC107688027 other downstream 778336 68679317 ~ 68681675 (+)
G538561 NA other downstream 803357 68704398 ~ 68704696 (+)
G538607 NA other downstream 910078 68811119 ~ 68811890 (+)
G538859 NA other downstream 1005004 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 1095042 68996083 ~ 69002828 (+)

Expression



Co-expression Network