Gene
RNA
| Item | Value |
|---|---|
| gene id | G538297 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 68192416 ~ 68192755 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU609547 | True | 340 | lncRNA | 0.59 | 1 | 68192416 | 68192755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526415 | LOC106587344 | coding | downstream | 32121 | 68137961 ~ 68160295 (-) |
| LOC110526950 | LOC106587343 | coding | downstream | 60897 | 68116813 ~ 68131519 (-) |
| mindy2 | LOC106587341 | coding | downstream | 189763 | 67973652 ~ 68002653 (-) |
| LOC110526411 | LOC106587339 | coding | downstream | 238780 | 67903147 ~ 67953636 (-) |
| LOC100136691 | LOC100136691 | coding | downstream | 291607 | 67898266 ~ 67900809 (-) |
| LOC110526951 | LOC106587321 | coding | upstream | 42099 | 68234854 ~ 68257368 (-) |
| LOC110526418 | cgnl1 | coding | upstream | 71312 | 68264067 ~ 68295566 (-) |
| LOC110526419 | tcf12 | coding | upstream | 105410 | 68298165 ~ 68399974 (-) |
| LOC118965111 | NA | coding | upstream | 118010 | 68310765 ~ 68310847 (-) |
| LOC110526422 | NA | coding | upstream | 240390 | 68432656 ~ 68439524 (-) |
| G538287 | NA | non-coding | downstream | 23127 | 68165537 ~ 68169289 (-) |
| G538199 | NA | non-coding | downstream | 177849 | 68013186 ~ 68014567 (-) |
| G538190 | NA | non-coding | downstream | 181502 | 68006837 ~ 68010914 (-) |
| G538144 | myo1e | non-coding | downstream | 310231 | 67880561 ~ 67882185 (-) |
| G538119 | NA | non-coding | downstream | 344415 | 67837647 ~ 67848001 (-) |
| G538299 | NA | non-coding | upstream | 913 | 68193668 ~ 68193885 (-) |
| G538330 | NA | non-coding | upstream | 36782 | 68229537 ~ 68229849 (-) |
| G538265 | NA | non-coding | upstream | 44868 | 68237623 ~ 68237906 (-) |
| G538412 | NA | non-coding | upstream | 221047 | 68413802 ~ 68415413 (-) |
| G538277 | NA | other | downstream | 47509 | 68142251 ~ 68144907 (-) |
| G536630 | LOC106562092 | other | downstream | 1642442 | 66549367 ~ 66549974 (-) |
| LOC110526387 | LOC106587187 | other | downstream | 1687391 | 66499996 ~ 66505055 (-) |
| LOC110526379 | LOC106587193 | other | downstream | 1910797 | 66277162 ~ 66326558 (-) |
| G536183 | NA | other | downstream | 1916127 | 66262486 ~ 66276289 (-) |
| G538460 | LOC106587433 | other | upstream | 317560 | 68510315 ~ 68516681 (-) |
| LOC110526447 | LOC106587408 | other | upstream | 614658 | 68807413 ~ 68816777 (-) |
| LOC110526455 | LOC106587401 | other | upstream | 756765 | 68949510 ~ 68953699 (-) |
| G539306 | NA | other | upstream | 809988 | 69002743 ~ 69005665 (-) |
| LOC110526462 | NA | other | upstream | 1080363 | 69272988 ~ 69289496 (-) |
