G537851


Basic Information

Item Value
gene id G537851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68213150 ~ 68213458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608948
gaccctgctaggtaaagtcccccttatctcagctcgctggtgaccatagcatctcccacctgtagcacacgctgcagcaggtatatctctctagtcacccccaaaaccaattatttctttggccgcctctccttccagttctctgctgccaatgactggaacaatctacaaaaatctctgaaactggaaacacttatctccctcactagctttaaaactgtcagagcagctcacagattactgcacctgtacatagcccacttataatttagcccaaacaactacctctttccctactgtattttattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608948 True 309 lncRNA 0.45 1 68213150 68213458

Neighbor

gene id symbol gene type direction distance location
aldh1a2 LOC106587345 coding upstream 24599 68165049 ~ 68188551 (+)
trnar-acg-5 NA coding upstream 93248 68119826 ~ 68130306 (+)
adam10a adam10 coding upstream 96744 68007028 ~ 68116406 (+)
LOC118965064 LOC106577244 coding upstream 149158 68060636 ~ 68063992 (+)
LOC110526412 LOC106587340 coding upstream 239559 67959814 ~ 67973591 (+)
LOC110526420 LOC106587436 coding downstream 195759 68409217 ~ 68433079 (+)
LOC110526423 LOC106587434 coding downstream 227876 68441334 ~ 68484719 (+)
LOC110526425 LOC106587433 coding downstream 281571 68495029 ~ 68546149 (+)
LOC110526426 LOC106587432 coding downstream 337442 68550900 ~ 68595583 (+)
LOC110526429 LOC106587430 coding downstream 383660 68597118 ~ 68603453 (+)
G537826 NA non-coding upstream 21722 68155288 ~ 68191428 (+)
G537819 NA non-coding upstream 55724 68144881 ~ 68157426 (+)
G537815 NA non-coding upstream 74187 68138250 ~ 68138963 (+)
G537744 NA non-coding upstream 95315 68117493 ~ 68117835 (+)
G537857 NA non-coding downstream 5595 68219053 ~ 68219290 (+)
G537877 NA non-coding downstream 24176 68237634 ~ 68238106 (+)
G538001 NA non-coding downstream 232066 68445524 ~ 68448895 (+)
G538021 NA non-coding downstream 274224 68487682 ~ 68526289 (+)
G538011 NA non-coding downstream 304296 68517754 ~ 68525267 (+)
G537617 atxn1l other upstream 445537 67766756 ~ 67767613 (+)
G537606 NA other upstream 456532 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 1102522 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 1108242 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 1194497 67013220 ~ 67018653 (+)
LOC110526436 LOC107688027 other downstream 465919 68679317 ~ 68681675 (+)
G538561 NA other downstream 490940 68704398 ~ 68704696 (+)
G538607 NA other downstream 597661 68811119 ~ 68811890 (+)
G538859 NA other downstream 692587 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 782625 68996083 ~ 69002828 (+)

Expression


Co-expression Network