G537877


Basic Information

Item Value
gene id G537877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68237634 ~ 68238106 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU608977
aaatcaatcaaatgtatttataaagcccttcttaaatcaactgatgtcacaaagttctgtacagaaacccagcctagaaccccaaacagcaagcaatgcaggtgtagaagcaactccctagaaaggccagggcctaggaagaaacttagagaggaaccaggctatgaggggaggAGTCCTCTTCAGAAGAggagtcctcttctgtctgtgctgggtggagattatgacagaacatggtcaagacgACGAGCAGGGTCacataataataatgaataataataataaaacatacaCTGATTTCATTAGTATGCGCTGGATGAGTATCATTCAAGAAAGGCACATCATGCTTATCATAACTTCTCATATACACAGTCCTGGCAGTGTAGACAAATGACTTATACCAGTGGCTCAGGGATGGCAGTCAGTAGAAATACAGTTCTTCAGTTTGTCAGATATAGTTAAATATTATCcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU608977 True 473 lncRNA 0.41 1 68237634 68238106

Neighbor

gene id symbol gene type direction distance location
aldh1a2 LOC106587345 coding upstream 49083 68165049 ~ 68188551 (+)
trnar-acg-5 NA coding upstream 117732 68119826 ~ 68130306 (+)
adam10a adam10 coding upstream 121228 68007028 ~ 68116406 (+)
LOC118965064 LOC106577244 coding upstream 173642 68060636 ~ 68063992 (+)
LOC110526412 LOC106587340 coding upstream 264043 67959814 ~ 67973591 (+)
LOC110526420 LOC106587436 coding downstream 171111 68409217 ~ 68433079 (+)
LOC110526423 LOC106587434 coding downstream 203228 68441334 ~ 68484719 (+)
LOC110526425 LOC106587433 coding downstream 256923 68495029 ~ 68546149 (+)
LOC110526426 LOC106587432 coding downstream 312794 68550900 ~ 68595583 (+)
LOC110526429 LOC106587430 coding downstream 359012 68597118 ~ 68603453 (+)
G537857 NA non-coding upstream 18344 68219053 ~ 68219290 (+)
G537851 NA non-coding upstream 24176 68213150 ~ 68213458 (+)
G537826 NA non-coding upstream 46206 68155288 ~ 68191428 (+)
G537819 NA non-coding upstream 80208 68144881 ~ 68157426 (+)
G537815 NA non-coding upstream 98671 68138250 ~ 68138963 (+)
G538001 NA non-coding downstream 207418 68445524 ~ 68448895 (+)
G538021 NA non-coding downstream 249576 68487682 ~ 68526289 (+)
G538011 NA non-coding downstream 279648 68517754 ~ 68525267 (+)
G538008 NA non-coding downstream 309050 68547156 ~ 68547476 (+)
G538010 NA non-coding downstream 311026 68549132 ~ 68549490 (+)
G537617 atxn1l other upstream 470021 67766756 ~ 67767613 (+)
G537606 NA other upstream 481016 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 1127006 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 1132726 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 1218981 67013220 ~ 67018653 (+)
LOC110526436 LOC107688027 other downstream 441271 68679317 ~ 68681675 (+)
G538561 NA other downstream 466292 68704398 ~ 68704696 (+)
G538607 NA other downstream 573013 68811119 ~ 68811890 (+)
G538859 NA other downstream 667939 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 757977 68996083 ~ 69002828 (+)

Expression


Co-expression Network