G538021


Basic Information

Item Value
gene id G538021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68487682 ~ 68526289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU609162
gtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactcctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU609162 True 230 lncRNA 0.43 2 68487682 68526289

Neighbor

gene id symbol gene type direction distance location
LOC110526423 LOC106587434 coding upstream 2963 68441334 ~ 68484719 (+)
LOC110526420 LOC106587436 coding upstream 54603 68409217 ~ 68433079 (+)
aldh1a2 LOC106587345 coding upstream 299131 68165049 ~ 68188551 (+)
trnar-acg-5 NA coding upstream 367780 68119826 ~ 68130306 (+)
adam10a adam10 coding upstream 371276 68007028 ~ 68116406 (+)
LOC110526426 LOC106587432 coding downstream 24611 68550900 ~ 68595583 (+)
LOC110526429 LOC106587430 coding downstream 70829 68597118 ~ 68603453 (+)
LOC110526427 ccpg1 coding downstream 79307 68605596 ~ 68623888 (+)
LOC110526430 LOC106587426 coding downstream 101285 68627574 ~ 68640613 (+)
LOC110526432 LOC106587425 coding downstream 114501 68640790 ~ 68644591 (+)
G538001 NA non-coding upstream 38787 68445524 ~ 68448895 (+)
G537877 NA non-coding upstream 249576 68237634 ~ 68238106 (+)
G537857 NA non-coding upstream 268392 68219053 ~ 68219290 (+)
G537851 NA non-coding upstream 274224 68213150 ~ 68213458 (+)
G537826 NA non-coding upstream 296254 68155288 ~ 68191428 (+)
G538008 NA non-coding downstream 20867 68547156 ~ 68547476 (+)
G538010 NA non-coding downstream 22843 68549132 ~ 68549490 (+)
G538507 pigb non-coding downstream 100156 68626445 ~ 68626777 (+)
G538554 NA non-coding downstream 169418 68695707 ~ 68695910 (+)
G538555 NA non-coding downstream 170586 68696875 ~ 68697228 (+)
G537617 atxn1l other upstream 720069 67766756 ~ 67767613 (+)
G537606 NA other upstream 731064 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 1377054 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 1382774 67104306 ~ 67104908 (+)
G536995 zfhx3 other upstream 1469029 67013220 ~ 67018653 (+)
LOC110526436 LOC107688027 other downstream 153088 68679317 ~ 68681675 (+)
G538561 NA other downstream 178109 68704398 ~ 68704696 (+)
G538607 NA other downstream 284830 68811119 ~ 68811890 (+)
G538859 NA other downstream 379756 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 469794 68996083 ~ 69002828 (+)

Expression


Co-expression Network