G538554


Basic Information

Item Value
gene id G538554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68695707 ~ 68695910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU609853
ATAATTTCCCGACAGGCAATTGGTTACAGGGAAACCTGAGGCACTGTGATTGGTGAGAAAGAACATGCCGTTTCCCTATTGGTTAGAATCACGTATCTTTACAGGAAGGAAGTATTTGACTGTTTTTGTTGCTTGATTGGAAGGAAATATTTGTCGGAACTGATCCTTTACTGCTTTAGCTATTTGCTTGCAACTGTGTAGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU609853 True 204 lncRNA 0.40 1 68695707 68695910

Neighbor

gene id symbol gene type direction distance location
LOC110526436 LOC107688027 coding upstream 14032 68679317 ~ 68681675 (+)
LOC110526434 cog4 coding upstream 31315 68644828 ~ 68664392 (+)
LOC110526432 LOC106587425 coding upstream 51116 68640790 ~ 68644591 (+)
LOC110526430 LOC106587426 coding upstream 55094 68627574 ~ 68640613 (+)
LOC110526427 ccpg1 coding upstream 71819 68605596 ~ 68623888 (+)
LOC110526444 LOC106587414 coding downstream 79564 68775474 ~ 68780317 (+)
LOC110526448 tha11 coding downstream 121029 68816939 ~ 68818769 (+)
LOC110526954 cmtr2 coding downstream 152761 68848671 ~ 68856233 (+)
LOC110526451 LOC106587405 coding downstream 185680 68881590 ~ 68899511 (+)
LOC110526452 LOC106587404 coding downstream 226928 68922838 ~ 68936761 (+)
G538507 pigb non-coding upstream 68930 68626445 ~ 68626777 (+)
G538010 NA non-coding upstream 146217 68549132 ~ 68549490 (+)
G538008 NA non-coding upstream 148231 68547156 ~ 68547476 (+)
G538021 NA non-coding upstream 169418 68487682 ~ 68526289 (+)
G538011 NA non-coding upstream 170440 68517754 ~ 68525267 (+)
G538555 NA non-coding downstream 965 68696875 ~ 68697228 (+)
G538559 NA non-coding downstream 6715 68702625 ~ 68702966 (+)
G538562 NA non-coding downstream 8855 68704765 ~ 68705103 (+)
G538563 NA non-coding downstream 9278 68705188 ~ 68705423 (+)
G538564 NA non-coding downstream 11009 68706919 ~ 68707300 (+)
G537617 atxn1l other upstream 928094 67766756 ~ 67767613 (+)
G537606 NA other upstream 939089 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 1585079 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 1590799 67104306 ~ 67104908 (+)
G538561 NA other downstream 8488 68704398 ~ 68704696 (+)
G538607 NA other downstream 115209 68811119 ~ 68811890 (+)
G538859 NA other downstream 210135 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 300173 68996083 ~ 69002828 (+)
LOC110526955 LOC106587395 other downstream 315696 69007055 ~ 69018414 (+)

Expression


Co-expression Network