Gene
RNA
| Item | Value |
|---|---|
| gene id | G538555 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 68696875 ~ 68697228 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU609854 | True | 354 | lncRNA | 0.40 | 1 | 68696875 | 68697228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526436 | LOC107688027 | coding | upstream | 15200 | 68679317 ~ 68681675 (+) |
| LOC110526434 | cog4 | coding | upstream | 32483 | 68644828 ~ 68664392 (+) |
| LOC110526432 | LOC106587425 | coding | upstream | 52284 | 68640790 ~ 68644591 (+) |
| LOC110526430 | LOC106587426 | coding | upstream | 56262 | 68627574 ~ 68640613 (+) |
| LOC110526427 | ccpg1 | coding | upstream | 72987 | 68605596 ~ 68623888 (+) |
| LOC110526444 | LOC106587414 | coding | downstream | 78246 | 68775474 ~ 68780317 (+) |
| LOC110526448 | tha11 | coding | downstream | 119711 | 68816939 ~ 68818769 (+) |
| LOC110526954 | cmtr2 | coding | downstream | 151443 | 68848671 ~ 68856233 (+) |
| LOC110526451 | LOC106587405 | coding | downstream | 184362 | 68881590 ~ 68899511 (+) |
| LOC110526452 | LOC106587404 | coding | downstream | 225610 | 68922838 ~ 68936761 (+) |
| G538554 | NA | non-coding | upstream | 965 | 68695707 ~ 68695910 (+) |
| G538507 | pigb | non-coding | upstream | 70098 | 68626445 ~ 68626777 (+) |
| G538010 | NA | non-coding | upstream | 147385 | 68549132 ~ 68549490 (+) |
| G538008 | NA | non-coding | upstream | 149399 | 68547156 ~ 68547476 (+) |
| G538021 | NA | non-coding | upstream | 170586 | 68487682 ~ 68526289 (+) |
| G538559 | NA | non-coding | downstream | 5397 | 68702625 ~ 68702966 (+) |
| G538562 | NA | non-coding | downstream | 7537 | 68704765 ~ 68705103 (+) |
| G538563 | NA | non-coding | downstream | 7960 | 68705188 ~ 68705423 (+) |
| G538564 | NA | non-coding | downstream | 9691 | 68706919 ~ 68707300 (+) |
| G538565 | LOC106587420 | non-coding | downstream | 10181 | 68707409 ~ 68709628 (+) |
| G537617 | atxn1l | other | upstream | 929262 | 67766756 ~ 67767613 (+) |
| G537606 | NA | other | upstream | 940257 | 67754556 ~ 67756618 (+) |
| G537032 | LOC106587324 | other | upstream | 1586247 | 67109676 ~ 67110628 (+) |
| G537029 | zfhx3 | other | upstream | 1591967 | 67104306 ~ 67104908 (+) |
| G538561 | NA | other | downstream | 7170 | 68704398 ~ 68704696 (+) |
| G538607 | NA | other | downstream | 113891 | 68811119 ~ 68811890 (+) |
| G538859 | NA | other | downstream | 208817 | 68906045 ~ 68906847 (+) |
| G538877 | LOC106582599 | other | downstream | 298855 | 68996083 ~ 69002828 (+) |
| LOC110526955 | LOC106587395 | other | downstream | 314378 | 69007055 ~ 69018414 (+) |
