G538561


Basic Information

Item Value
gene id G538561
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68704398 ~ 68704696 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU609862
CTTGcactgatgcagtgccttagaccgctgtgccactcaggagcccaaatgattaacttcaggaagcagaggagggaacatgccccgatccacatcaacggtactgcagtagagagagtcacTAGTTTAAAGTTCCTCAGCATTCACATCACAGAGGACGTgtcatggaccaacaacaccaccactcttgtcaagaggtTGCAACAGCGTCTCTACTTCCTTAGGCGGCTGAAGAAATCTGGCATGCCGCCccgggtcctctccaaatactaccgctgcaccatcaagagcgtcctgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU609862 True 299 TUCP 0.53 1 68704398 68704696

Neighbor

gene id symbol gene type direction distance location
LOC110526436 LOC107688027 coding upstream 22723 68679317 ~ 68681675 (+)
LOC110526434 cog4 coding upstream 40006 68644828 ~ 68664392 (+)
LOC110526432 LOC106587425 coding upstream 59807 68640790 ~ 68644591 (+)
LOC110526430 LOC106587426 coding upstream 63785 68627574 ~ 68640613 (+)
LOC110526427 ccpg1 coding upstream 80510 68605596 ~ 68623888 (+)
LOC110526444 LOC106587414 coding downstream 70778 68775474 ~ 68780317 (+)
LOC110526448 tha11 coding downstream 112243 68816939 ~ 68818769 (+)
LOC110526954 cmtr2 coding downstream 143975 68848671 ~ 68856233 (+)
LOC110526451 LOC106587405 coding downstream 176894 68881590 ~ 68899511 (+)
LOC110526452 LOC106587404 coding downstream 218142 68922838 ~ 68936761 (+)
G538559 NA non-coding upstream 1432 68702625 ~ 68702966 (+)
G538555 NA non-coding upstream 7170 68696875 ~ 68697228 (+)
G538554 NA non-coding upstream 8488 68695707 ~ 68695910 (+)
G538507 pigb non-coding upstream 77621 68626445 ~ 68626777 (+)
G538010 NA non-coding upstream 154908 68549132 ~ 68549490 (+)
G538562 NA non-coding downstream 69 68704765 ~ 68705103 (+)
G538563 NA non-coding downstream 492 68705188 ~ 68705423 (+)
G538564 NA non-coding downstream 2223 68706919 ~ 68707300 (+)
G538565 LOC106587420 non-coding downstream 2713 68707409 ~ 68709628 (+)
G538785 NA non-coding downstream 140862 68845558 ~ 68845766 (+)
G537617 atxn1l other upstream 936785 67766756 ~ 67767613 (+)
G537606 NA other upstream 947780 67754556 ~ 67756618 (+)
G537032 LOC106587324 other upstream 1593770 67109676 ~ 67110628 (+)
G537029 zfhx3 other upstream 1599490 67104306 ~ 67104908 (+)
G538607 NA other downstream 106423 68811119 ~ 68811890 (+)
G538859 NA other downstream 201349 68906045 ~ 68906847 (+)
G538877 LOC106582599 other downstream 291387 68996083 ~ 69002828 (+)
LOC110526955 LOC106587395 other downstream 306910 69007055 ~ 69018414 (+)
G539068 NA other downstream 656945 69361641 ~ 69367642 (+)

Expression


Co-expression Network