G538859


Basic Information

Item Value
gene id G538859
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68906045 ~ 68906847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU610240
AGCTGGGTGCCTGtatgttccgtctgctgtccgcgaccgtttgatctattgggcccatacGTCACACTCTGGTCACCCTGGCATTGGTTGGACGGTGCATtgccttagtgggaagtactggtggtccaccttggccaaggacgtgagggtttatgtttcctcctgctcggtgtgcgctcagTGCCATGCTcccaggcacctgcccagagggaagttacaacccctacccattccacaacggccgtggtcgcaaCTGTCGGTGGACTTCCTGATGCATCTTCCTCCTtcacagggcaacaccacgatcctggtcgttgtggatcggttttctaagtcctgccgtctcctccctttgcccggtctccctacggccctacagactgcggaggccctgttcactcacatcttccggcactacggggtgcctgagaaTATAGTCTCTGattggggtccccagttcacgtccagggtcTGGAGAGCATTCATGGAACGTCTAGGGGTCTTGGGCagcctcacctcaggttttcaccccgagagtaacagGCAGGTGGAGAAAATAAACCAGGAtttgggcaggtttctgcggtcatattgccaggaccggccgggggagtgggcggcgttcatcccctgggcagagttggcccaaaactcactccgccactcctccactaacctctctccttTCCAGTGCTTAATGGGGTATCAGCATCTTGGCATCAAAGCCAGAtcgaagctcctgcggtggacgaagGGTTTAAGCGCTCGGAGGAGACCTGGGACGCCGCCCATGTGCATCCTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU610240 True 803 TUCP 0.58 1 68906045 68906847

Neighbor

gene id symbol gene type direction distance location
LOC110526451 LOC106587405 coding upstream 6534 68881590 ~ 68899511 (+)
LOC110526954 cmtr2 coding upstream 49812 68848671 ~ 68856233 (+)
LOC110526448 tha11 coding upstream 87276 68816939 ~ 68818769 (+)
LOC110526444 LOC106587414 coding upstream 125728 68775474 ~ 68780317 (+)
LOC110526436 LOC107688027 coding upstream 224370 68679317 ~ 68681675 (+)
LOC110526452 LOC106587404 coding downstream 15991 68922838 ~ 68936761 (+)
LOC110526454 LOC106587403 coding downstream 31795 68938642 ~ 68946874 (+)
LOC118965123 NA coding downstream 48418 68955265 ~ 68955385 (+)
LOC110526457 LOC106587399 coding downstream 58208 68965055 ~ 68977010 (+)
LOC110526456 LOC106587398 coding downstream 72050 68978897 ~ 68988139 (+)
G538858 NA non-coding upstream 135 68905618 ~ 68905910 (+)
G538857 NA non-coding upstream 639 68905156 ~ 68905406 (+)
G538856 NA non-coding upstream 1191 68904543 ~ 68904854 (+)
G538852 NA non-coding upstream 2620 68902381 ~ 68903425 (+)
G538851 NA non-coding upstream 5021 68900795 ~ 68901024 (+)
G538863 NA non-coding downstream 3747 68910594 ~ 68910832 (+)
G538864 NA non-coding downstream 4374 68911221 ~ 68911537 (+)
G538867 NA non-coding downstream 6926 68913773 ~ 68914036 (+)
G538869 NA non-coding downstream 9209 68916056 ~ 68916300 (+)
G538906 NA non-coding downstream 54368 68961215 ~ 68961454 (+)
G538607 NA other upstream 94155 68811119 ~ 68811890 (+)
G538561 NA other upstream 201349 68704398 ~ 68704696 (+)
G537617 atxn1l other upstream 1138432 67766756 ~ 67767613 (+)
G537606 NA other upstream 1149427 67754556 ~ 67756618 (+)
G538877 LOC106582599 other downstream 89236 68996083 ~ 69002828 (+)
LOC110526955 LOC106587395 other downstream 104759 69007055 ~ 69018414 (+)
G539068 NA other downstream 454794 69361641 ~ 69367642 (+)
G539959 NA other downstream 1109495 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 1129347 70036194 ~ 70039507 (+)

Expression


Co-expression Network