G538907


Basic Information

Item Value
gene id G538907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 68961665 ~ 68961869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU610289
gaatgttatttatttttatgcacttttctctctatgcatattctgaccttgaatttaaaCATGaaaatagcatgctattcaccccACTTTTCTTTCAAGGTGGAGATCTAAGAAATTAAGTTGTGACGGAGCGGGGTGTCTACAGATACGCCcaattctgaccttgacttattTCCATCATAATTCCACTACCTTTCTgcatgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU610289 True 205 lncRNA 0.37 1 68961665 68961869

Neighbor

gene id symbol gene type direction distance location
LOC118965123 NA coding upstream 6280 68955265 ~ 68955385 (+)
LOC110526454 LOC106587403 coding upstream 14791 68938642 ~ 68946874 (+)
LOC110526452 LOC106587404 coding upstream 24904 68922838 ~ 68936761 (+)
LOC110526451 LOC106587405 coding upstream 62154 68881590 ~ 68899511 (+)
LOC110526954 cmtr2 coding upstream 105432 68848671 ~ 68856233 (+)
LOC110526457 LOC106587399 coding downstream 3186 68965055 ~ 68977010 (+)
LOC110526456 LOC106587398 coding downstream 17028 68978897 ~ 68988139 (+)
LOC110526955 LOC106587395 coding downstream 45186 69007055 ~ 69018414 (+)
LOC110526458 LOC106587394 coding downstream 69013 69030882 ~ 69133616 (+)
LOC110526459 LOC106562249 coding downstream 186461 69148330 ~ 69189966 (+)
G538906 NA non-coding upstream 211 68961215 ~ 68961454 (+)
G538869 NA non-coding upstream 45365 68916056 ~ 68916300 (+)
G538867 NA non-coding upstream 47629 68913773 ~ 68914036 (+)
G538864 NA non-coding upstream 50128 68911221 ~ 68911537 (+)
G538863 NA non-coding upstream 50833 68910594 ~ 68910832 (+)
G538878 NA non-coding downstream 28969 68990838 ~ 68992839 (+)
G538925 NA non-coding downstream 56980 69018849 ~ 69019053 (+)
G538931 NA non-coding downstream 80752 69042621 ~ 69044027 (+)
G538891 NA non-coding downstream 82201 69044070 ~ 69144935 (+)
G538977 NA non-coding downstream 253698 69215567 ~ 69216547 (+)
G538859 NA other upstream 54818 68906045 ~ 68906847 (+)
G538607 NA other upstream 149775 68811119 ~ 68811890 (+)
G538561 NA other upstream 256969 68704398 ~ 68704696 (+)
LOC110526436 LOC107688027 other upstream 280013 68679317 ~ 68681675 (+)
G537617 atxn1l other upstream 1194052 67766756 ~ 67767613 (+)
G538877 LOC106582599 other downstream 34214 68996083 ~ 69002828 (+)
G539068 NA other downstream 399772 69361641 ~ 69367642 (+)
G539959 NA other downstream 1054473 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 1074325 70036194 ~ 70039507 (+)

Expression


Co-expression Network