G539306


Basic Information

Item Value
gene id G539306
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 69002743 ~ 69005665 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU610759
cgccaaatacaacaggtgtaggtagaccttacagtgaaatgcttacttacgagcccctaaccaacaatgcagtttcaaaaaatatagataagaataagagataaaagtaacaagtcatTAAAAAGcatcagtgaaataacaatagcgagactatatacaggggggtactgatacagagtcaatgtgcgggggcaccggttatttgaggtagtttgtacatgtaggtagagttattaaagtgactatgcatagatgacaacaggacaggacaatggacaggacaggacaatggACAGGACAACGGATAAAGTGTTGTCTATAAGGCGCTGAGGTTGCATGTGTATGAACAAAAATAAACTTTAACAAAACTCTATGACTGTCATACTGTAGAGATGGTCCCTTCTATCAGGGCATTTACTATAAAAGGTTTAGATTTCCCCATAATATGTGAAACAACCCACTTTTGGAAAGAATGAAACAAACTTGTTTTGCTGTATTTCAATAGTTCTTTGCATCTAATATGTTGATTTCGGTGTTGTTTTGAAACAATCCCAAGGTTAGGACTGTCAGCTTGATTCACAAGCAGGGTTCAAATCTGGATGGTATTAATCACACCCAGGTTATCTCTCCCATTCTCTAGCTGTCCAATGTCTCCCACTGACTAATTCTCTGTTGAGCTGTCTCTCAGCTAGGGCTCATCCTGTGTGACTCTGGGTCTGTGGAGTATAGGTTTACCCAGAGGGCCAAGCCAGCACCTCTCTGTTGGCTGTCACAGAGCAGACACATCCATCCTCCAGTCACTGCAGCCACACAATCAAGCCCTGTACTGGGCCACAGCGGCAGGCTCCCTGGTTTCAGACCGCTGTCTGCAGGCCCCGTAACCTGAGTGGGGAAAGTGAAAGGATCCCTCCCTGCGCCCCTGGCCCTTTAACTCTGTGTCACTGTGGCCTGTTGTGGAACAATAACTTCCTCTTGTATTATTGATGTTGTAGGGAACAGCAGTCAGTCAGCGCTGTGGGTTTCAGTTTTCTAAAGGAATATATAATGAGAAACAGGATAGCGCCAGCCTCTCTATCTATGTCCCTGCAAAACACACTGGTGAGACCTTCGAAACAGAGGATGCTGGAGAGACAAGGGACCTGTTTGAATACATGATGAGGGCATCCTTCCCAAAGAGATAGAtattctatctatctctatgatccatccatcctcccctcttgAAATAATCACTTGTTGGATGGGTGAAGGCAAGGACGGTATGGTacgtattaatttgtggatgtccatcatccattttgtatgatactGTGTAatacgaattacaatttgtatgatatgttgcgaatttgcaaaatgtatcaTATAttatgaattccaatttgttgtgacTAACATTACctagctggctaacgttggctaggctaggggttagggttaaggttaggagttaggttaaagggatgaggttagggttaggggatgggTTAGCTAAAATTGTTAAGGTTAtgattaggggaagggttagctaacatgctaagtagttgcaaagtagcttaAAAGTATAAGTAGTTGacaagttgctaattagctaaaatgctaatgttgtccgtgatgagattcgaacctGCAACCTTTGGGGTTATACGCCCACCGActcaccccgaccaaccaccctcgTTTTTCCTAAAGGAaacttctgtcttatgtaactataccaaatgtaacatatcatactaatttgaatgTCCTGGATTTACTTTTACCATGTTACGTCtattctatgagaccaggctggaccCTCTTATGTTATATCAGCTCTATTTTCCAAAGCATCTGTAGGctaattcctggtgattttatTAATCATCATATTATCCTTATTGTGTCAACAATGTTCTTGGACCACATGAAGAAGTTGGTAGAGACTAAATTAAAACGTACTGACGTATTTGACTAATGGGACCTACAAAGACAATGCGGGTGCAGTCTGAGCTTCTCCTTGTGAACTTGACAGGTTACGTGACGTTTACCTGTTCAGGAGCTTCATTTGATCCAACTGAATACAGATACTTGATGTCAGGTACTGTACATGATAGATCAAGAACAGCAAAGGGCTGAGATTCACTCCACCGGGACTGAGCACTGGGGCATCATGCAGAGGATGATCAGCTTCACTGTGCTCCTCATTACTGCTCTGTTCGCATTTTTTTCCAGTCTGGAGAAGGAATACATATATGTGAAACAAGAAATGAACTGGCAGCAGGCTCAAAAGTACTGCAAAGAGCACTACACTGACCTGGCCTCCTTCAATAAGCTGTATGATGATGAGCTCAAAACCATAGGGGGCAAATATGGCACCTATACCTGGATTGGCATGTACAGAGATGACTTGACTACAGAGTGGAAGTTGTCTGGAGGGGAAAGCTTACTCTTTAAAATGTAGGCTCCTCAGCAACCAGATGGGAGCAAAAATAACTGTGTTGTAATGCAACATTTGACGGGTTATGTGAGAACTGTGCTGAAATACACCCTTTCTTCTAATATAAGGAGAAGCGTGACAGTGATCTGgtcctggtaaaggagaagaagACGTGGGAGGAGGCTCTGGAGTACTGCAGGCAGCACCACAGTAACCTCTCCAGCCTGCTCTCTAAGACAGAGCATCTCCAAACCCAACAGCAAATCTCAGAGGCCCTGGGGGACTCTGGCCAAAATGGGAAAGCACTGGGGAACCTGGGACTGTGAGGACAGGCTGAACTTCGTCTGCTCCACGAAGAAAGAAGAAAAGACAGAGCCTTCTAGGCCTCCTATTGTCTATCATGatgaccaatgttccctctaagctgcacaTGGGCACGCAATAGTCCCGAAACTGCCACGCAGCTCCCTCAGGACTGCAGCAAAGAAGAAATATCAgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU610759 True 2923 TUCP 0.44 1 69002743 69005665
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526455 LOC106587401 coding downstream 49044 68949510 ~ 68953699 (-)
LOC110526450 dnaaf1 coding downstream 172987 68827577 ~ 68829756 (-)
LOC110526447 LOC106587408 coding downstream 185966 68807413 ~ 68816777 (-)
LOC110526446 LOC106587411 coding downstream 210049 68786733 ~ 68792694 (-)
LOC110526445 LOC106587410 coding downstream 216860 68782240 ~ 68785883 (-)
LOC110526956 NA coding upstream 12996 69018661 ~ 69020716 (-)
LOC118964924 LOC106562250 coding upstream 241959 69125027 ~ 69272291 (-)
LOC110526462 NA coding upstream 267323 69272988 ~ 69289496 (-)
trnar-acg-6 NA coding upstream 295477 69301142 ~ 69301214 (-)
LOC110526463 LOC106587389 coding upstream 299908 69305573 ~ 69317496 (-)
G539332 NA non-coding downstream 7088 68995394 ~ 68995655 (-)
G539331 NA non-coding downstream 7439 68994741 ~ 68995304 (-)
G539307 NA non-coding downstream 9309 68990899 ~ 68993434 (-)
G539303 LOC106587398 non-coding downstream 14584 68986396 ~ 68988159 (-)
G539305 NA non-coding downstream 23195 68978918 ~ 68979548 (-)
G539335 NA non-coding upstream 1906 69007571 ~ 69007823 (-)
G539355 NA non-coding upstream 48768 69054433 ~ 69055722 (-)
G539378 NA non-coding upstream 74819 69080484 ~ 69081192 (-)
G539383 LOC106587394 non-coding upstream 88560 69094225 ~ 69104526 (-)
G539382 LOC103462559 non-coding upstream 112702 69118367 ~ 69120636 (-)
G538460 LOC106587433 other downstream 486062 68510315 ~ 68516681 (-)
G538277 NA other downstream 857836 68142251 ~ 68144907 (-)
G536630 LOC106562092 other downstream 2452769 66549367 ~ 66549974 (-)
G539674 LOC106587381 other upstream 610089 69615754 ~ 69616671 (-)
G539714 NA other upstream 683242 69688907 ~ 69690015 (-)
G540376 NA other upstream 1098133 70103798 ~ 70107175 (-)
LOC110526488 LOC106562298 other upstream 1645299 70623828 ~ 70666213 (-)

Expression

G539306 Expression in all Baseline Samples

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G539306 Expression in each Bioproject

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G539306 Expression in each Sample
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Co-expression Network