G539068


Basic Information

Item Value
gene id G539068
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 69361641 ~ 69367642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU610498
TGATTAAATGTTTAATAATGCTTTCTCAGATAAATAAAAAGCAGTTCACAAACAGGGGTTTACAACACCTTCAAAATAAATATATCAAAACAAGTTGAACACAAGACCAGGAAATATAGGACTGTCAATGTGTAGCGTCATGTCTTCTCATCTTACAGATATTGATTGTCACTTTGTCATATGTTGGATGTAAAGCAATTAACCAGTTAAGGACTTCAGCTCATATTTacatacccagctctctctcactctctcagctTCAGTGAGGAAACATTCAATCTCCACCACAAGTGGCCATTTTCTCCTTTTCATGTCTCTGACCCTCCCTAATTTCTCACCCCCCTAAACCTTACCTGAACCATTCCcttTCTGTCATTATAATTGATACAACTCTACCAAATGCATCCGTTCCTGCCATACCTGTATGTCTCGACTAAACTTCCCTCTCCTTTAGGTCCTTCTTTGTTCCTTAGGACTTAGTGCCTCAcccctcccagcctcccagccctATCCACTGCCACACTCCAAAACTCTTACCACAgtactccctcctccctctcctcattccACCCTCTAAATccctacctttctctctccctctctagaacTCATACTGGGAGATGAACATGGTGATCTTGGTGATGTACCGCCCCAGCTGGACCCCTTTCTCCAGCTCGGTCATCTCCACCTCTGCCTCCAGTGTAGCAGGGCCTTGCACCGGGCTCCCCAGCACCAGCTGGCCTGTCTGTCGGTCTGACCGCTGCACCGTGAAGTGGCGTCGGGCCTGCCCGCGGCCCAGCAGGGAGAAACGCAGCGTGTCGCCCATGAGGCGGAGGGCCGACACACGGAACATGGTGCGTGGTGCTGACAGGTTGGATACGACAGACAGGTAGTGGTGGGAGATGGAGTTAGGGGCCTGAGAGCACACCTTGTTGTCCACAGAGCAGGGGTTACGCTCGCAAC

Function

NR:

description
fibulin-7-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU610498 True 963 TUCP 0.50 2 69361641 69367642

Neighbor

gene id symbol gene type direction distance location
trnar-acg-7 NA coding upstream 59237 69302332 ~ 69302404 (+)
LOC118964925 NA coding upstream 68447 69280185 ~ 69293194 (+)
rhcg rhcg coding upstream 133156 69222165 ~ 69228485 (+)
LOC110526459 LOC106562249 coding upstream 171675 69148330 ~ 69189966 (+)
LOC110526458 LOC106587394 coding upstream 228025 69030882 ~ 69133616 (+)
LOC110526466 LOC106587388 coding downstream 19683 69387325 ~ 69422563 (+)
LOC110526467 LOC106587383 coding downstream 73727 69441369 ~ 69526649 (+)
pdcd5 LOC106587385 coding downstream 163545 69531187 ~ 69539723 (+)
mvda erg19 coding downstream 174251 69541893 ~ 69550751 (+)
LOC110526470 LOC106587382 coding downstream 184857 69552499 ~ 69583243 (+)
G538993 LOC106587389 non-coding upstream 51661 69307979 ~ 69309980 (+)
G538991 NA non-coding upstream 86419 69241293 ~ 69275222 (+)
G538977 NA non-coding upstream 145094 69215567 ~ 69216547 (+)
G538891 NA non-coding upstream 216706 69044070 ~ 69144935 (+)
G539105 NA non-coding downstream 41106 69408748 ~ 69427787 (+)
G539138 NA non-coding downstream 102342 69469984 ~ 69471242 (+)
G539139 NA non-coding downstream 106706 69474348 ~ 69477339 (+)
G539213 NA non-coding downstream 290856 69658498 ~ 69660305 (+)
LOC110526955 LOC106587395 other upstream 349679 69007055 ~ 69018414 (+)
G538877 LOC106582599 other upstream 358813 68996083 ~ 69002828 (+)
G538859 NA other upstream 454794 68906045 ~ 68906847 (+)
G538607 NA other upstream 549751 68811119 ~ 68811890 (+)
G538561 NA other upstream 656945 68704398 ~ 68704696 (+)
G539959 NA other downstream 648700 70015270 ~ 70019477 (+)
LOC110525047 psf2 other downstream 668552 70036194 ~ 70039507 (+)
G540179 NA other downstream 1114308 70481950 ~ 70484368 (+)
LOC110526485 fam92b other downstream 1184153 70551763 ~ 70558098 (+)
cmc2 cmc2 other downstream 1247883 70615476 ~ 70621510 (+)

Expression


Co-expression Network