Gene
RNA
| Item | Value |
|---|---|
| gene id | G539138 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 69469984 ~ 69471242 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU610570 | True | 238 | lncRNA | 0.44 | 2 | 69469984 | 69471242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526466 | LOC106587388 | coding | upstream | 47421 | 69387325 ~ 69422563 (+) |
| trnar-acg-7 | NA | coding | upstream | 167580 | 69302332 ~ 69302404 (+) |
| LOC118964925 | NA | coding | upstream | 176790 | 69280185 ~ 69293194 (+) |
| rhcg | rhcg | coding | upstream | 241499 | 69222165 ~ 69228485 (+) |
| LOC110526459 | LOC106562249 | coding | upstream | 280018 | 69148330 ~ 69189966 (+) |
| pdcd5 | LOC106587385 | coding | downstream | 59945 | 69531187 ~ 69539723 (+) |
| mvda | erg19 | coding | downstream | 70651 | 69541893 ~ 69550751 (+) |
| LOC110526470 | LOC106587382 | coding | downstream | 81257 | 69552499 ~ 69583243 (+) |
| mc1r | mc1r_par1 | coding | downstream | 118803 | 69590045 ~ 69591263 (+) |
| LOC110526471 | tbb3 | coding | downstream | 127911 | 69599153 ~ 69604659 (+) |
| G539105 | NA | non-coding | upstream | 42197 | 69408748 ~ 69427787 (+) |
| G538993 | LOC106587389 | non-coding | upstream | 160004 | 69307979 ~ 69309980 (+) |
| G538991 | NA | non-coding | upstream | 194762 | 69241293 ~ 69275222 (+) |
| G538977 | NA | non-coding | upstream | 253437 | 69215567 ~ 69216547 (+) |
| G539139 | NA | non-coding | downstream | 3106 | 69474348 ~ 69477339 (+) |
| G539213 | NA | non-coding | downstream | 187256 | 69658498 ~ 69660305 (+) |
| G539239 | NA | non-coding | downstream | 215706 | 69686948 ~ 69687800 (+) |
| G539258 | NA | non-coding | downstream | 248694 | 69719936 ~ 69720174 (+) |
| G539068 | NA | other | upstream | 102342 | 69361641 ~ 69367642 (+) |
| LOC110526955 | LOC106587395 | other | upstream | 458022 | 69007055 ~ 69018414 (+) |
| G538877 | LOC106582599 | other | upstream | 467156 | 68996083 ~ 69002828 (+) |
| G538859 | NA | other | upstream | 563137 | 68906045 ~ 68906847 (+) |
| G538607 | NA | other | upstream | 658094 | 68811119 ~ 68811890 (+) |
| G539959 | NA | other | downstream | 545100 | 70015270 ~ 70019477 (+) |
| LOC110525047 | psf2 | other | downstream | 564952 | 70036194 ~ 70039507 (+) |
| G540179 | NA | other | downstream | 1010708 | 70481950 ~ 70484368 (+) |
| LOC110526485 | fam92b | other | downstream | 1080553 | 70551763 ~ 70558098 (+) |
| cmc2 | cmc2 | other | downstream | 1144283 | 70615476 ~ 70621510 (+) |
