Gene
RNA
| Item | Value |
|---|---|
| gene id | G539638 |
| gene name | LOC106587382 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 69567125 ~ 69567815 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611132 | True | 379 | lncRNA | 0.54 | 3 | 69567125 | 69567815 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526465 | LOC106587363 | coding | downstream | 102642 | 69367059 ~ 69464483 (-) |
| LOC110526464 | NA | coding | downstream | 237678 | 69321643 ~ 69329447 (-) |
| LOC110526463 | LOC106587389 | coding | downstream | 249629 | 69305573 ~ 69317496 (-) |
| trnar-acg-6 | NA | coding | downstream | 265911 | 69301142 ~ 69301214 (-) |
| LOC110526462 | NA | coding | downstream | 277963 | 69272988 ~ 69289496 (-) |
| LOC110526474 | LOC106562278 | coding | upstream | 90668 | 69658483 ~ 69695479 (-) |
| LOC110526478 | foxf1 | coding | upstream | 167759 | 69735574 ~ 69739533 (-) |
| irf8 | NA | coding | upstream | 390266 | 69958081 ~ 69966024 (-) |
| dusp22a | ds22a | coding | upstream | 408130 | 69975945 ~ 70014932 (-) |
| LOC110526482 | LOC106587370 | coding | upstream | 447455 | 70015270 ~ 70024522 (-) |
| G539635 | NA | non-coding | downstream | 16396 | 69549569 ~ 69550729 (-) |
| G539633 | NA | non-coding | downstream | 19666 | 69543683 ~ 69547459 (-) |
| G539590 | LOC106587385 | non-coding | downstream | 27403 | 69531215 ~ 69539722 (-) |
| G539555 | NA | non-coding | downstream | 155796 | 69408737 ~ 69411329 (-) |
| G539523 | NA | non-coding | downstream | 217238 | 69343207 ~ 69349887 (-) |
| G539674 | LOC106587381 | non-coding | upstream | 47939 | 69615754 ~ 69616671 (-) |
| G539677 | NA | non-coding | upstream | 51706 | 69619521 ~ 69621101 (-) |
| G539678 | NA | non-coding | upstream | 54200 | 69622015 ~ 69628549 (-) |
| G539689 | LOC106587380 | non-coding | upstream | 84583 | 69652398 ~ 69654894 (-) |
| G539690 | NA | non-coding | upstream | 88830 | 69656645 ~ 69657093 (-) |
| G539306 | NA | other | downstream | 561460 | 69002743 ~ 69005665 (-) |
| LOC110526455 | LOC106587401 | other | downstream | 613461 | 68949510 ~ 68953699 (-) |
| LOC110526447 | LOC106587408 | other | downstream | 755895 | 68807413 ~ 68816777 (-) |
| G538460 | LOC106587433 | other | downstream | 1050444 | 68510315 ~ 68516681 (-) |
| G539714 | NA | other | upstream | 121092 | 69688907 ~ 69690015 (-) |
| G540376 | NA | other | upstream | 535983 | 70103798 ~ 70107175 (-) |
| LOC110526488 | LOC106562298 | other | upstream | 1083149 | 70623828 ~ 70666213 (-) |
| G541798 | NA | other | upstream | 2041716 | 71609531 ~ 71613840 (-) |
