Gene
RNA
| Item | Value |
|---|---|
| gene id | G539854 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 69854551 ~ 69854782 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611377 | True | 232 | lncRNA | 0.53 | 1 | 69854551 | 69854782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964926 | NA | coding | upstream | 97718 | 69739619 ~ 69756833 (+) |
| LOC110526477 | mthfsd | coding | upstream | 121895 | 69724498 ~ 69732656 (+) |
| gas8 | gas8 | coding | upstream | 145817 | 69700287 ~ 69708734 (+) |
| trnav-cac-7 | NA | coding | upstream | 154414 | 69700065 ~ 69700137 (+) |
| LOC110526472 | LOC106587380 | coding | upstream | 200162 | 69642275 ~ 69654389 (+) |
| emc8 | LOC106587369 | coding | downstream | 171380 | 70026162 ~ 70028929 (+) |
| LOC110525047 | psf2 | coding | downstream | 182206 | 70036194 ~ 70039507 (+) |
| LOC110526484 | LOC106587367 | coding | downstream | 194368 | 70049150 ~ 70058063 (+) |
| LOC110526485 | fam92b | coding | downstream | 696981 | 70551763 ~ 70558098 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | downstream | 739965 | 70594747 ~ 70599188 (+) |
| G539843 | NA | non-coding | upstream | 12393 | 69841928 ~ 69842158 (+) |
| G539806 | NA | non-coding | upstream | 51107 | 69803178 ~ 69803444 (+) |
| G539787 | NA | non-coding | upstream | 68936 | 69785296 ~ 69785615 (+) |
| G539783 | NA | non-coding | upstream | 74141 | 69780184 ~ 69780410 (+) |
| G539278 | NA | non-coding | upstream | 91790 | 69762545 ~ 69762761 (+) |
| G539862 | NA | non-coding | downstream | 9221 | 69864003 ~ 69864220 (+) |
| G539867 | NA | non-coding | downstream | 13262 | 69868044 ~ 69868345 (+) |
| G539871 | NA | non-coding | downstream | 24712 | 69879494 ~ 69879880 (+) |
| G539873 | NA | non-coding | downstream | 27368 | 69882150 ~ 69882389 (+) |
| G539875 | NA | non-coding | downstream | 32392 | 69887174 ~ 69887480 (+) |
| G539068 | NA | other | upstream | 486909 | 69361641 ~ 69367642 (+) |
| LOC110526955 | LOC106587395 | other | upstream | 842589 | 69007055 ~ 69018414 (+) |
| G538877 | LOC106582599 | other | upstream | 851723 | 68996083 ~ 69002828 (+) |
| G538859 | NA | other | upstream | 947704 | 68906045 ~ 68906847 (+) |
| G538607 | NA | other | upstream | 1042661 | 68811119 ~ 68811890 (+) |
| G539959 | NA | other | downstream | 161560 | 70015270 ~ 70019477 (+) |
| G540179 | NA | other | downstream | 627168 | 70481950 ~ 70484368 (+) |
| cmc2 | cmc2 | other | downstream | 760743 | 70615476 ~ 70621510 (+) |
