Gene
RNA
| Item | Value |
|---|---|
| gene id | G539872 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 69879516 ~ 69879856 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611395 | True | 341 | lncRNA | 0.30 | 1 | 69879516 | 69879856 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526478 | foxf1 | coding | downstream | 139983 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 184037 | 69658483 ~ 69695479 (-) |
| LOC110526465 | LOC106587363 | coding | downstream | 415033 | 69367059 ~ 69464483 (-) |
| LOC110526464 | NA | coding | downstream | 550069 | 69321643 ~ 69329447 (-) |
| LOC110526463 | LOC106587389 | coding | downstream | 562020 | 69305573 ~ 69317496 (-) |
| irf8 | NA | coding | upstream | 78225 | 69958081 ~ 69966024 (-) |
| dusp22a | ds22a | coding | upstream | 96089 | 69975945 ~ 70014932 (-) |
| LOC110526482 | LOC106587370 | coding | upstream | 135414 | 70015270 ~ 70024522 (-) |
| gse1 | LOC106587451 | coding | upstream | 182691 | 70062547 ~ 70519005 (-) |
| LOC118964927 | NA | coding | upstream | 618690 | 70498546 ~ 70503416 (-) |
| G539870 | NA | non-coding | downstream | 2993 | 69876173 ~ 69876523 (-) |
| G539855 | NA | non-coding | downstream | 24369 | 69854892 ~ 69855147 (-) |
| G539845 | NA | non-coding | downstream | 35466 | 69843764 ~ 69844050 (-) |
| G539844 | NA | non-coding | downstream | 37259 | 69841942 ~ 69842257 (-) |
| G539841 | NA | non-coding | downstream | 39742 | 69839502 ~ 69839774 (-) |
| G539874 | NA | non-coding | upstream | 4546 | 69884402 ~ 69884720 (-) |
| G539887 | NA | non-coding | upstream | 41441 | 69921297 ~ 69921527 (-) |
| G540325 | NA | non-coding | upstream | 102706 | 69982562 ~ 69982983 (-) |
| G540326 | NA | non-coding | upstream | 104615 | 69984471 ~ 69984812 (-) |
| G540353 | NA | non-coding | upstream | 162517 | 70042373 ~ 70042841 (-) |
| G539714 | NA | other | downstream | 189501 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 263197 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 590020 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 873851 | 69002743 ~ 69005665 (-) |
| LOC110526455 | LOC106587401 | other | downstream | 925852 | 68949510 ~ 68953699 (-) |
| G540376 | NA | other | upstream | 223942 | 70103798 ~ 70107175 (-) |
| LOC110526488 | LOC106562298 | other | upstream | 771108 | 70623828 ~ 70666213 (-) |
| G541798 | NA | other | upstream | 1729675 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2720419 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2779600 | 72659456 ~ 72666713 (-) |
