Gene
RNA
| Item | Value |
|---|---|
| gene id | G539887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 69921297 ~ 69921527 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611412 | True | 231 | lncRNA | 0.44 | 1 | 69921297 | 69921527 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526478 | foxf1 | coding | downstream | 181764 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 225818 | 69658483 ~ 69695479 (-) |
| LOC110526465 | LOC106587363 | coding | downstream | 456814 | 69367059 ~ 69464483 (-) |
| LOC110526464 | NA | coding | downstream | 591850 | 69321643 ~ 69329447 (-) |
| LOC110526463 | LOC106587389 | coding | downstream | 603801 | 69305573 ~ 69317496 (-) |
| irf8 | NA | coding | upstream | 36554 | 69958081 ~ 69966024 (-) |
| dusp22a | ds22a | coding | upstream | 54418 | 69975945 ~ 70014932 (-) |
| LOC110526482 | LOC106587370 | coding | upstream | 93743 | 70015270 ~ 70024522 (-) |
| gse1 | LOC106587451 | coding | upstream | 141020 | 70062547 ~ 70519005 (-) |
| LOC118964927 | NA | coding | upstream | 577019 | 70498546 ~ 70503416 (-) |
| G539874 | NA | non-coding | downstream | 36577 | 69884402 ~ 69884720 (-) |
| G539872 | NA | non-coding | downstream | 41441 | 69879516 ~ 69879856 (-) |
| G539870 | NA | non-coding | downstream | 44774 | 69876173 ~ 69876523 (-) |
| G539855 | NA | non-coding | downstream | 66150 | 69854892 ~ 69855147 (-) |
| G539845 | NA | non-coding | downstream | 77247 | 69843764 ~ 69844050 (-) |
| G540325 | NA | non-coding | upstream | 61035 | 69982562 ~ 69982983 (-) |
| G540326 | NA | non-coding | upstream | 62944 | 69984471 ~ 69984812 (-) |
| G540353 | NA | non-coding | upstream | 120846 | 70042373 ~ 70042841 (-) |
| G540355 | NA | non-coding | upstream | 123028 | 70044555 ~ 70044781 (-) |
| G540357 | NA | non-coding | upstream | 129383 | 70050910 ~ 70051143 (-) |
| G539714 | NA | other | downstream | 231282 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 304978 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 631801 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 915632 | 69002743 ~ 69005665 (-) |
| LOC110526455 | LOC106587401 | other | downstream | 967633 | 68949510 ~ 68953699 (-) |
| G540376 | NA | other | upstream | 182271 | 70103798 ~ 70107175 (-) |
| LOC110526488 | LOC106562298 | other | upstream | 729437 | 70623828 ~ 70666213 (-) |
| G541798 | NA | other | upstream | 1688004 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2678748 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2737929 | 72659456 ~ 72666713 (-) |
