Gene
RNA
| Item | Value |
|---|---|
| gene id | G540325 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 69982562 ~ 69982983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106933171 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611911 | True | 359 | lncRNA | 0.57 | 2 | 69982562 | 69982983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| irf8 | NA | coding | downstream | 16538 | 69958081 ~ 69966024 (-) |
| LOC110526478 | foxf1 | coding | downstream | 243029 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 287083 | 69658483 ~ 69695479 (-) |
| LOC110526465 | LOC106587363 | coding | downstream | 518079 | 69367059 ~ 69464483 (-) |
| LOC110526464 | NA | coding | downstream | 653115 | 69321643 ~ 69329447 (-) |
| LOC110526482 | LOC106587370 | coding | upstream | 32287 | 70015270 ~ 70024522 (-) |
| gse1 | LOC106587451 | coding | upstream | 79564 | 70062547 ~ 70519005 (-) |
| LOC118964927 | NA | coding | upstream | 515563 | 70498546 ~ 70503416 (-) |
| LOC118964928 | NA | coding | upstream | 544113 | 70527096 ~ 70556412 (-) |
| LOC110526959 | LOC106587454 | coding | upstream | 609575 | 70592558 ~ 70593481 (-) |
| G539887 | NA | non-coding | downstream | 61035 | 69921297 ~ 69921527 (-) |
| G539874 | NA | non-coding | downstream | 97842 | 69884402 ~ 69884720 (-) |
| G539872 | NA | non-coding | downstream | 102706 | 69879516 ~ 69879856 (-) |
| G539870 | NA | non-coding | downstream | 106039 | 69876173 ~ 69876523 (-) |
| G539855 | NA | non-coding | downstream | 127415 | 69854892 ~ 69855147 (-) |
| G540326 | NA | non-coding | upstream | 1488 | 69984471 ~ 69984812 (-) |
| G540353 | NA | non-coding | upstream | 59390 | 70042373 ~ 70042841 (-) |
| G540355 | NA | non-coding | upstream | 61572 | 70044555 ~ 70044781 (-) |
| G540357 | NA | non-coding | upstream | 67927 | 70050910 ~ 70051143 (-) |
| G540323 | NA | non-coding | upstream | 73406 | 70056389 ~ 70057154 (-) |
| G539714 | NA | other | downstream | 292547 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 366243 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 693066 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 976897 | 69002743 ~ 69005665 (-) |
| LOC110526455 | LOC106587401 | other | downstream | 1028898 | 68949510 ~ 68953699 (-) |
| G540376 | NA | other | upstream | 120815 | 70103798 ~ 70107175 (-) |
| LOC110526488 | LOC106562298 | other | upstream | 667981 | 70623828 ~ 70666213 (-) |
| G541798 | NA | other | upstream | 1626548 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2617292 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2676473 | 72659456 ~ 72666713 (-) |
