Gene
RNA
| Item | Value |
|---|---|
| gene id | G539949 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70002196 ~ 70002823 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611479 | True | 567 | lncRNA | 0.39 | 2 | 70002196 | 70002823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964926 | NA | coding | upstream | 245363 | 69739619 ~ 69756833 (+) |
| LOC110526477 | mthfsd | coding | upstream | 269540 | 69724498 ~ 69732656 (+) |
| gas8 | gas8 | coding | upstream | 293462 | 69700287 ~ 69708734 (+) |
| trnav-cac-7 | NA | coding | upstream | 302059 | 69700065 ~ 69700137 (+) |
| LOC110526472 | LOC106587380 | coding | upstream | 347807 | 69642275 ~ 69654389 (+) |
| emc8 | LOC106587369 | coding | downstream | 23339 | 70026162 ~ 70028929 (+) |
| LOC110525047 | psf2 | coding | downstream | 34165 | 70036194 ~ 70039507 (+) |
| LOC110526484 | LOC106587367 | coding | downstream | 46327 | 70049150 ~ 70058063 (+) |
| LOC110526485 | fam92b | coding | downstream | 548940 | 70551763 ~ 70558098 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | downstream | 591924 | 70594747 ~ 70599188 (+) |
| G539927 | NA | non-coding | upstream | 18679 | 69981682 ~ 69983517 (+) |
| G539925 | NA | non-coding | upstream | 26898 | 69975094 ~ 69975298 (+) |
| G539904 | NA | non-coding | upstream | 60467 | 69941513 ~ 69941729 (+) |
| G539903 | NA | non-coding | upstream | 62650 | 69939239 ~ 69939546 (+) |
| G539875 | NA | non-coding | upstream | 114716 | 69887174 ~ 69887480 (+) |
| G539959 | NA | non-coding | downstream | 12447 | 70015270 ~ 70019477 (+) |
| G539980 | NA | non-coding | downstream | 43990 | 70046813 ~ 70047132 (+) |
| G539985 | NA | non-coding | downstream | 51394 | 70054217 ~ 70054496 (+) |
| G539986 | NA | non-coding | downstream | 57144 | 70059967 ~ 70061147 (+) |
| G539068 | NA | other | upstream | 634554 | 69361641 ~ 69367642 (+) |
| LOC110526955 | LOC106587395 | other | upstream | 990234 | 69007055 ~ 69018414 (+) |
| G538877 | LOC106582599 | other | upstream | 999368 | 68996083 ~ 69002828 (+) |
| G538859 | NA | other | upstream | 1095349 | 68906045 ~ 68906847 (+) |
| G538607 | NA | other | upstream | 1190306 | 68811119 ~ 68811890 (+) |
| G540179 | NA | other | downstream | 479127 | 70481950 ~ 70484368 (+) |
| cmc2 | cmc2 | other | downstream | 612702 | 70615476 ~ 70621510 (+) |
