Gene
RNA
| Item | Value |
|---|---|
| gene id | G540357 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70050910 ~ 70051143 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611943 | True | 234 | lncRNA | 0.37 | 1 | 70050910 | 70051143 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526482 | LOC106587370 | coding | downstream | 26388 | 70015270 ~ 70024522 (-) |
| dusp22a | ds22a | coding | downstream | 35978 | 69975945 ~ 70014932 (-) |
| irf8 | NA | coding | downstream | 84886 | 69958081 ~ 69966024 (-) |
| LOC110526478 | foxf1 | coding | downstream | 311377 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 355431 | 69658483 ~ 69695479 (-) |
| gse1 | LOC106587451 | coding | upstream | 11404 | 70062547 ~ 70519005 (-) |
| LOC118964927 | NA | coding | upstream | 447403 | 70498546 ~ 70503416 (-) |
| LOC118964928 | NA | coding | upstream | 475953 | 70527096 ~ 70556412 (-) |
| LOC110526959 | LOC106587454 | coding | upstream | 541415 | 70592558 ~ 70593481 (-) |
| LOC110526960 | atmin | coding | upstream | 548858 | 70600001 ~ 70613388 (-) |
| G540355 | NA | non-coding | downstream | 6129 | 70044555 ~ 70044781 (-) |
| G540353 | NA | non-coding | downstream | 8069 | 70042373 ~ 70042841 (-) |
| G540326 | NA | non-coding | downstream | 66098 | 69984471 ~ 69984812 (-) |
| G540325 | NA | non-coding | downstream | 67927 | 69982562 ~ 69982983 (-) |
| G539887 | NA | non-coding | downstream | 129383 | 69921297 ~ 69921527 (-) |
| G540323 | NA | non-coding | upstream | 5246 | 70056389 ~ 70057154 (-) |
| G540358 | NA | non-coding | upstream | 8824 | 70059967 ~ 70061150 (-) |
| G540362 | NA | non-coding | upstream | 13574 | 70064717 ~ 70065002 (-) |
| G540363 | NA | non-coding | upstream | 23277 | 70074420 ~ 70075388 (-) |
| G540370 | NA | non-coding | upstream | 40006 | 70091149 ~ 70092163 (-) |
| G539714 | NA | other | downstream | 360895 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 434591 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 761414 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 1045245 | 69002743 ~ 69005665 (-) |
| LOC110526455 | LOC106587401 | other | downstream | 1097246 | 68949510 ~ 68953699 (-) |
| G540376 | NA | other | upstream | 52655 | 70103798 ~ 70107175 (-) |
| LOC110526488 | LOC106562298 | other | upstream | 599821 | 70623828 ~ 70666213 (-) |
| G541798 | NA | other | upstream | 1558388 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2549132 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2608313 | 72659456 ~ 72666713 (-) |
