Gene
RNA
| Item | Value |
|---|---|
| gene id | G540370 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70091149 ~ 70092163 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| prostaglandin reductase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611962 | True | 348 | lncRNA | 0.48 | 2 | 70091149 | 70092163 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526482 | LOC106587370 | coding | downstream | 66627 | 70015270 ~ 70024522 (-) |
| dusp22a | ds22a | coding | downstream | 76217 | 69975945 ~ 70014932 (-) |
| irf8 | NA | coding | downstream | 125125 | 69958081 ~ 69966024 (-) |
| LOC110526478 | foxf1 | coding | downstream | 351616 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 395670 | 69658483 ~ 69695479 (-) |
| LOC118964927 | NA | coding | upstream | 406383 | 70498546 ~ 70503416 (-) |
| LOC118964928 | NA | coding | upstream | 434933 | 70527096 ~ 70556412 (-) |
| LOC110526959 | LOC106587454 | coding | upstream | 500395 | 70592558 ~ 70593481 (-) |
| LOC110526960 | atmin | coding | upstream | 507838 | 70600001 ~ 70613388 (-) |
| LOC110526488 | LOC106562298 | coding | upstream | 531665 | 70623828 ~ 70666213 (-) |
| G540363 | NA | non-coding | downstream | 15761 | 70074420 ~ 70075388 (-) |
| G540362 | NA | non-coding | downstream | 26147 | 70064717 ~ 70065002 (-) |
| G540358 | NA | non-coding | downstream | 29999 | 70059967 ~ 70061150 (-) |
| G540323 | NA | non-coding | downstream | 33995 | 70056389 ~ 70057154 (-) |
| G540357 | NA | non-coding | downstream | 40006 | 70050910 ~ 70051143 (-) |
| G540375 | NA | non-coding | upstream | 9816 | 70101979 ~ 70146842 (-) |
| G540425 | NA | non-coding | upstream | 113051 | 70205214 ~ 70211268 (-) |
| G540442 | NA | non-coding | upstream | 136955 | 70229118 ~ 70261859 (-) |
| G540451 | NA | non-coding | upstream | 150577 | 70242740 ~ 70243695 (-) |
| G540463 | NA | non-coding | upstream | 159556 | 70251719 ~ 70253130 (-) |
| G539714 | NA | other | downstream | 401134 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 474830 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 801653 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 1085484 | 69002743 ~ 69005665 (-) |
| LOC110526455 | LOC106587401 | other | downstream | 1137485 | 68949510 ~ 68953699 (-) |
| G540376 | NA | other | upstream | 11635 | 70103798 ~ 70107175 (-) |
| G541798 | NA | other | upstream | 1517368 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2508112 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2567293 | 72659456 ~ 72666713 (-) |
