Gene
RNA
| Item | Value |
|---|---|
| gene id | G540015 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70102603 ~ 70102910 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611557 | True | 250 | lncRNA | 0.45 | 2 | 70102603 | 70102910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526484 | LOC106587367 | coding | upstream | 44540 | 70049150 ~ 70058063 (+) |
| LOC110525047 | psf2 | coding | upstream | 64146 | 70036194 ~ 70039507 (+) |
| emc8 | LOC106587369 | coding | upstream | 73674 | 70026162 ~ 70028929 (+) |
| LOC118964926 | NA | coding | upstream | 345770 | 69739619 ~ 69756833 (+) |
| LOC110526477 | mthfsd | coding | upstream | 369947 | 69724498 ~ 69732656 (+) |
| LOC110526485 | fam92b | coding | downstream | 448853 | 70551763 ~ 70558098 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | downstream | 491837 | 70594747 ~ 70599188 (+) |
| cmc2 | cmc2 | coding | downstream | 512566 | 70615476 ~ 70621510 (+) |
| LOC110526495 | LOC106587464 | coding | downstream | 1578691 | 71681601 ~ 71690360 (+) |
| LOC118964930 | NA | coding | downstream | 1859014 | 71961924 ~ 71967802 (+) |
| G540011 | NA | non-coding | upstream | 4658 | 70096415 ~ 70097945 (+) |
| G540008 | NA | non-coding | upstream | 11620 | 70089960 ~ 70090983 (+) |
| G539986 | NA | non-coding | upstream | 41456 | 70059967 ~ 70061147 (+) |
| G539985 | NA | non-coding | upstream | 48107 | 70054217 ~ 70054496 (+) |
| G540017 | NA | non-coding | downstream | 1745 | 70104655 ~ 70106006 (+) |
| G540021 | NA | non-coding | downstream | 6257 | 70109167 ~ 70111224 (+) |
| G540020 | NA | non-coding | downstream | 10793 | 70113703 ~ 70118208 (+) |
| G540059 | NA | non-coding | downstream | 99693 | 70202603 ~ 70203369 (+) |
| G540060 | NA | non-coding | downstream | 100833 | 70203743 ~ 70205028 (+) |
| G539959 | NA | other | upstream | 83126 | 70015270 ~ 70019477 (+) |
| G539068 | NA | other | upstream | 734961 | 69361641 ~ 69367642 (+) |
| LOC110526955 | LOC106587395 | other | upstream | 1090641 | 69007055 ~ 69018414 (+) |
| G538877 | LOC106582599 | other | upstream | 1099775 | 68996083 ~ 69002828 (+) |
| G540179 | NA | other | downstream | 379040 | 70481950 ~ 70484368 (+) |
| G541903 | NA | other | downstream | 1697130 | 71800040 ~ 71804462 (+) |
| G542053 | NA | other | downstream | 1998470 | 72101380 ~ 72102474 (+) |
