G540376


Basic Information

Item Value
gene id G540376
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 70103798 ~ 70107175 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU611977
ACTACAtccgccacacacactactacatacgccacacacactactacatacgccacacacactactacatatgccacacacactactacatatgccacacacactactacatacgccacacacactactacatacaccacacacacactactacatacaccacacatagACCACACACaaactactacatacaccacacacactactacagacaccacacacacactactacatatgccacacactactacagacaccacacacacactactacatatgccacacactactacatacaccacacacactactacgtacgccacacacactactacacacaccacacacactactacatacaccacacacactactacatacaccacacacactactacatacgccacacactactacatacaccacacactactacgtacgccacacacactacctcatacgccacacacactactacatacgccacacacacacactactacatacaccacacacactactacagacaccacacacacactactacatacgccacacactactacatacaccacacacactactacgtacgccacacacactactacagacaccacacacacactacgacgtacgccacacacactactacaaacgccacacacactactacatatgcCACACACTACTACaaacgccacacacactactacatatgccacacactactacatacaccacacacactactacgtacgccacacacactactacaaacgccacacacactactacatacaccacacacacactactaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU611977 True 819 TUCP 0.46 2 70103798 70107175

Neighbor

gene id symbol gene type direction distance location
LOC110526482 LOC106587370 coding downstream 79276 70015270 ~ 70024522 (-)
dusp22a ds22a coding downstream 88866 69975945 ~ 70014932 (-)
irf8 NA coding downstream 137774 69958081 ~ 69966024 (-)
LOC110526478 foxf1 coding downstream 364265 69735574 ~ 69739533 (-)
LOC110526474 LOC106562278 coding downstream 408319 69658483 ~ 69695479 (-)
LOC118964927 NA coding upstream 391371 70498546 ~ 70503416 (-)
LOC118964928 NA coding upstream 419921 70527096 ~ 70556412 (-)
LOC110526959 LOC106587454 coding upstream 485383 70592558 ~ 70593481 (-)
LOC110526960 atmin coding upstream 492826 70600001 ~ 70613388 (-)
LOC110526488 LOC106562298 coding upstream 516653 70623828 ~ 70666213 (-)
G540370 NA non-coding downstream 11635 70091149 ~ 70092163 (-)
G540363 NA non-coding downstream 28410 70074420 ~ 70075388 (-)
G540362 NA non-coding downstream 38796 70064717 ~ 70065002 (-)
G540358 NA non-coding downstream 42648 70059967 ~ 70061150 (-)
G540323 NA non-coding downstream 46644 70056389 ~ 70057154 (-)
G540425 NA non-coding upstream 98039 70205214 ~ 70211268 (-)
G540442 NA non-coding upstream 121943 70229118 ~ 70261859 (-)
G540451 NA non-coding upstream 135565 70242740 ~ 70243695 (-)
G540463 NA non-coding upstream 144544 70251719 ~ 70253130 (-)
G540483 NA non-coding upstream 181532 70288707 ~ 70288921 (-)
G539714 NA other downstream 413783 69688907 ~ 69690015 (-)
G539674 LOC106587381 other downstream 487479 69615754 ~ 69616671 (-)
LOC110526462 NA other downstream 814302 69272988 ~ 69289496 (-)
G539306 NA other downstream 1098133 69002743 ~ 69005665 (-)
LOC110526455 LOC106587401 other downstream 1150134 68949510 ~ 68953699 (-)
G541798 NA other upstream 1502356 71609531 ~ 71613840 (-)
G543091 NA other upstream 2493100 72600275 ~ 72721818 (-)
G543092 NA other upstream 2552281 72659456 ~ 72666713 (-)
G543224 LOC106587514 other upstream 2702602 72809777 ~ 72810172 (-)

Expression


Co-expression Network