G540074


Basic Information

Item Value
gene id G540074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 70237292 ~ 70237902 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU611625
tctaatagacagggaatacagacagactaaggaacaggtctgtttagagagacaactaatagacagggaatacagacagactaaggaacaggtctgtatagagacatctaatagacagggaatacagacagactaaggaacaggtctgtttagagagacatctaatagacagggaatacagacagactaaggaacaggtctgtttagagagccatctaatagacagggaatacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU611625 True 235 lncRNA 0.41 2 70237292 70237902

Neighbor

gene id symbol gene type direction distance location
LOC110526484 LOC106587367 coding upstream 179229 70049150 ~ 70058063 (+)
LOC110525047 psf2 coding upstream 198835 70036194 ~ 70039507 (+)
emc8 LOC106587369 coding upstream 208363 70026162 ~ 70028929 (+)
LOC118964926 NA coding upstream 480459 69739619 ~ 69756833 (+)
LOC110526477 mthfsd coding upstream 504636 69724498 ~ 69732656 (+)
LOC110526485 fam92b coding downstream 313861 70551763 ~ 70558098 (+)
si:ch73-103b9.2 cssa26h16orf46 coding downstream 356845 70594747 ~ 70599188 (+)
cmc2 cmc2 coding downstream 377574 70615476 ~ 70621510 (+)
LOC110526495 LOC106587464 coding downstream 1443699 71681601 ~ 71690360 (+)
LOC118964930 NA coding downstream 1724022 71961924 ~ 71967802 (+)
G540061 NA non-coding upstream 26053 70203980 ~ 70211239 (+)
G540062 NA non-coding upstream 26873 70206157 ~ 70210419 (+)
G540060 NA non-coding upstream 32264 70203743 ~ 70205028 (+)
G540059 NA non-coding upstream 33923 70202603 ~ 70203369 (+)
G540020 NA non-coding upstream 119084 70113703 ~ 70118208 (+)
G540077 NA non-coding downstream 5024 70242926 ~ 70243325 (+)
G540096 NA non-coding downstream 40061 70277963 ~ 70278178 (+)
G540097 NA non-coding downstream 44840 70282742 ~ 70282959 (+)
G540100 NA non-coding downstream 53175 70291077 ~ 70291315 (+)
G540101 NA non-coding downstream 57252 70295154 ~ 70295551 (+)
G539959 NA other upstream 217815 70015270 ~ 70019477 (+)
G539068 NA other upstream 869650 69361641 ~ 69367642 (+)
LOC110526955 LOC106587395 other upstream 1225330 69007055 ~ 69018414 (+)
G538877 LOC106582599 other upstream 1234464 68996083 ~ 69002828 (+)
G540179 NA other downstream 244048 70481950 ~ 70484368 (+)
G541903 NA other downstream 1562138 71800040 ~ 71804462 (+)
G542053 NA other downstream 1863478 72101380 ~ 72102474 (+)

Expression


Co-expression Network