Gene
RNA
| Item | Value |
|---|---|
| gene id | G540097 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70282742 ~ 70282959 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU611649 | True | 218 | lncRNA | 0.38 | 1 | 70282742 | 70282959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526484 | LOC106587367 | coding | upstream | 224679 | 70049150 ~ 70058063 (+) |
| LOC110525047 | psf2 | coding | upstream | 244285 | 70036194 ~ 70039507 (+) |
| emc8 | LOC106587369 | coding | upstream | 253813 | 70026162 ~ 70028929 (+) |
| LOC118964926 | NA | coding | upstream | 525909 | 69739619 ~ 69756833 (+) |
| LOC110526477 | mthfsd | coding | upstream | 550086 | 69724498 ~ 69732656 (+) |
| LOC110526485 | fam92b | coding | downstream | 268804 | 70551763 ~ 70558098 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | downstream | 311788 | 70594747 ~ 70599188 (+) |
| cmc2 | cmc2 | coding | downstream | 332517 | 70615476 ~ 70621510 (+) |
| LOC110526495 | LOC106587464 | coding | downstream | 1398642 | 71681601 ~ 71690360 (+) |
| LOC118964930 | NA | coding | downstream | 1678965 | 71961924 ~ 71967802 (+) |
| G540096 | NA | non-coding | upstream | 4564 | 70277963 ~ 70278178 (+) |
| G540077 | NA | non-coding | upstream | 39417 | 70242926 ~ 70243325 (+) |
| G540074 | NA | non-coding | upstream | 44840 | 70237292 ~ 70237902 (+) |
| G540061 | NA | non-coding | upstream | 71503 | 70203980 ~ 70211239 (+) |
| G540062 | NA | non-coding | upstream | 72323 | 70206157 ~ 70210419 (+) |
| G540100 | NA | non-coding | downstream | 8118 | 70291077 ~ 70291315 (+) |
| G540101 | NA | non-coding | downstream | 12195 | 70295154 ~ 70295551 (+) |
| G540109 | NA | non-coding | downstream | 30402 | 70313361 ~ 70313598 (+) |
| G540110 | NA | non-coding | downstream | 32660 | 70315619 ~ 70315847 (+) |
| G540117 | NA | non-coding | downstream | 62094 | 70345053 ~ 70345264 (+) |
| G539959 | NA | other | upstream | 263265 | 70015270 ~ 70019477 (+) |
| G539068 | NA | other | upstream | 915100 | 69361641 ~ 69367642 (+) |
| LOC110526955 | LOC106587395 | other | upstream | 1270780 | 69007055 ~ 69018414 (+) |
| G538877 | LOC106582599 | other | upstream | 1279914 | 68996083 ~ 69002828 (+) |
| G540179 | NA | other | downstream | 198991 | 70481950 ~ 70484368 (+) |
| G541903 | NA | other | downstream | 1517081 | 71800040 ~ 71804462 (+) |
| G542053 | NA | other | downstream | 1818421 | 72101380 ~ 72102474 (+) |
