Gene
RNA
| Item | Value |
|---|---|
| gene id | G540488 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70297452 ~ 70297681 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU612097 | True | 230 | lncRNA | 0.49 | 1 | 70297452 | 70297681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526482 | LOC106587370 | coding | downstream | 272930 | 70015270 ~ 70024522 (-) |
| dusp22a | ds22a | coding | downstream | 282520 | 69975945 ~ 70014932 (-) |
| irf8 | NA | coding | downstream | 331428 | 69958081 ~ 69966024 (-) |
| LOC110526478 | foxf1 | coding | downstream | 557919 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 601973 | 69658483 ~ 69695479 (-) |
| LOC118964927 | NA | coding | upstream | 200865 | 70498546 ~ 70503416 (-) |
| LOC118964928 | NA | coding | upstream | 229415 | 70527096 ~ 70556412 (-) |
| LOC110526959 | LOC106587454 | coding | upstream | 294877 | 70592558 ~ 70593481 (-) |
| LOC110526960 | atmin | coding | upstream | 302320 | 70600001 ~ 70613388 (-) |
| LOC110526488 | LOC106562298 | coding | upstream | 326147 | 70623828 ~ 70666213 (-) |
| G540486 | NA | non-coding | downstream | 3319 | 70293850 ~ 70294133 (-) |
| G540484 | NA | non-coding | downstream | 7888 | 70289283 ~ 70289564 (-) |
| G540483 | NA | non-coding | downstream | 8531 | 70288707 ~ 70288921 (-) |
| G540442 | NA | non-coding | downstream | 35593 | 70229118 ~ 70261859 (-) |
| G540496 | NA | non-coding | upstream | 8702 | 70306383 ~ 70306601 (-) |
| G540499 | NA | non-coding | upstream | 12352 | 70310033 ~ 70310296 (-) |
| G540502 | NA | non-coding | upstream | 18158 | 70315839 ~ 70316248 (-) |
| G540504 | NA | non-coding | upstream | 30957 | 70328638 ~ 70329808 (-) |
| G540505 | NA | non-coding | upstream | 32287 | 70329968 ~ 70330358 (-) |
| G540376 | NA | other | downstream | 190277 | 70103798 ~ 70107175 (-) |
| G539714 | NA | other | downstream | 607437 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 681133 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 1007956 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 1291787 | 69002743 ~ 69005665 (-) |
| G541798 | NA | other | upstream | 1311850 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2302594 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2361775 | 72659456 ~ 72666713 (-) |
| G543224 | LOC106587514 | other | upstream | 2512096 | 72809777 ~ 72810172 (-) |
