Gene
RNA
| Item | Value |
|---|---|
| gene id | G540547 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70395904 ~ 70399230 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU612163 | False | 249 | lncRNA | 0.41 | 2 | 70395904 | 70399230 |
| TU612164 | True | 249 | lncRNA | 0.41 | 2 | 70397107 | 70399230 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526482 | LOC106587370 | coding | downstream | 371382 | 70015270 ~ 70024522 (-) |
| dusp22a | ds22a | coding | downstream | 380972 | 69975945 ~ 70014932 (-) |
| irf8 | NA | coding | downstream | 429880 | 69958081 ~ 69966024 (-) |
| LOC110526478 | foxf1 | coding | downstream | 656371 | 69735574 ~ 69739533 (-) |
| LOC110526474 | LOC106562278 | coding | downstream | 700425 | 69658483 ~ 69695479 (-) |
| LOC118964927 | NA | coding | upstream | 99316 | 70498546 ~ 70503416 (-) |
| LOC118964928 | NA | coding | upstream | 127866 | 70527096 ~ 70556412 (-) |
| LOC110526959 | LOC106587454 | coding | upstream | 193328 | 70592558 ~ 70593481 (-) |
| LOC110526960 | atmin | coding | upstream | 200771 | 70600001 ~ 70613388 (-) |
| LOC110526488 | LOC106562298 | coding | upstream | 224598 | 70623828 ~ 70666213 (-) |
| G540515 | NA | non-coding | downstream | 51079 | 70344625 ~ 70344825 (-) |
| G540510 | NA | non-coding | downstream | 57881 | 70337793 ~ 70338023 (-) |
| G540509 | NA | non-coding | downstream | 58392 | 70337266 ~ 70337512 (-) |
| G540508 | NA | non-coding | downstream | 58768 | 70336923 ~ 70337136 (-) |
| G540506 | NA | non-coding | downstream | 59186 | 70334700 ~ 70336718 (-) |
| G540550 | NA | non-coding | upstream | 416 | 70399646 ~ 70417895 (-) |
| G540552 | NA | non-coding | upstream | 8436 | 70407666 ~ 70410988 (-) |
| G540558 | NA | non-coding | upstream | 16873 | 70416103 ~ 70419069 (-) |
| G540563 | NA | non-coding | upstream | 24266 | 70423496 ~ 70424009 (-) |
| G540579 | NA | non-coding | upstream | 48932 | 70448162 ~ 70448386 (-) |
| G540376 | NA | other | downstream | 288729 | 70103798 ~ 70107175 (-) |
| G539714 | NA | other | downstream | 705889 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 779585 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 1106408 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 1390239 | 69002743 ~ 69005665 (-) |
| G541798 | NA | other | upstream | 1210301 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2201045 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2260226 | 72659456 ~ 72666713 (-) |
| G543224 | LOC106587514 | other | upstream | 2410547 | 72809777 ~ 72810172 (-) |
