Gene
RNA
| Item | Value |
|---|---|
| gene id | G540629 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70510939 ~ 70511159 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| syntaxin-binding protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU612267 | True | 221 | lncRNA | 0.51 | 1 | 70510939 | 70511159 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964927 | NA | coding | downstream | 7523 | 70498546 ~ 70503416 (-) |
| LOC110526482 | LOC106587370 | coding | downstream | 486417 | 70015270 ~ 70024522 (-) |
| dusp22a | ds22a | coding | downstream | 496007 | 69975945 ~ 70014932 (-) |
| irf8 | NA | coding | downstream | 544915 | 69958081 ~ 69966024 (-) |
| LOC110526478 | foxf1 | coding | downstream | 771406 | 69735574 ~ 69739533 (-) |
| LOC118964928 | NA | coding | upstream | 15937 | 70527096 ~ 70556412 (-) |
| LOC110526959 | LOC106587454 | coding | upstream | 81399 | 70592558 ~ 70593481 (-) |
| LOC110526960 | atmin | coding | upstream | 88842 | 70600001 ~ 70613388 (-) |
| LOC110526488 | LOC106562298 | coding | upstream | 112669 | 70623828 ~ 70666213 (-) |
| mafa | maf | coding | upstream | 504888 | 71016047 ~ 71136889 (-) |
| G540626 | NA | non-coding | downstream | 3045 | 70507342 ~ 70507894 (-) |
| G540625 | NA | non-coding | downstream | 4271 | 70506463 ~ 70506668 (-) |
| G540614 | NA | non-coding | downstream | 15491 | 70495113 ~ 70495448 (-) |
| G540610 | NA | non-coding | downstream | 23659 | 70486935 ~ 70487280 (-) |
| G540609 | NA | non-coding | downstream | 24063 | 70486606 ~ 70486876 (-) |
| G540635 | NA | non-coding | upstream | 9126 | 70520285 ~ 70558002 (-) |
| G540664 | NA | non-coding | upstream | 65650 | 70576809 ~ 70577015 (-) |
| G540672 | NA | non-coding | upstream | 75935 | 70587094 ~ 70591191 (-) |
| G540673 | NA | non-coding | upstream | 82644 | 70593803 ~ 70594088 (-) |
| G540638 | NA | non-coding | upstream | 86703 | 70597862 ~ 70598783 (-) |
| G540376 | NA | other | downstream | 403764 | 70103798 ~ 70107175 (-) |
| G539714 | NA | other | downstream | 820924 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 894620 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 1221443 | 69272988 ~ 69289496 (-) |
| G539306 | NA | other | downstream | 1505274 | 69002743 ~ 69005665 (-) |
| G541798 | NA | other | upstream | 1098372 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 2089116 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 2148297 | 72659456 ~ 72666713 (-) |
| G543224 | LOC106587514 | other | upstream | 2298618 | 72809777 ~ 72810172 (-) |
