Gene
RNA
| Item | Value |
|---|---|
| gene id | G540714 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70697494 ~ 70697738 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU612356 | True | 245 | lncRNA | 0.38 | 1 | 70697494 | 70697738 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cmc2 | cmc2 | coding | upstream | 75984 | 70615476 ~ 70621510 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | upstream | 98306 | 70594747 ~ 70599188 (+) |
| LOC110526485 | fam92b | coding | upstream | 139396 | 70551763 ~ 70558098 (+) |
| LOC110526484 | LOC106587367 | coding | upstream | 639431 | 70049150 ~ 70058063 (+) |
| LOC110525047 | psf2 | coding | upstream | 659037 | 70036194 ~ 70039507 (+) |
| LOC110526495 | LOC106587464 | coding | downstream | 983863 | 71681601 ~ 71690360 (+) |
| LOC118964930 | NA | coding | downstream | 1264186 | 71961924 ~ 71967802 (+) |
| LOC110526507 | LOC106587468 | coding | downstream | 1313357 | 72011095 ~ 72021875 (+) |
| LOC110526509 | LOC106563533 | coding | downstream | 1376412 | 72074150 ~ 72098245 (+) |
| LOC110526510 | pkp3 | coding | downstream | 1420000 | 72117738 ~ 72135463 (+) |
| G540251 | NA | non-coding | upstream | 64695 | 70632332 ~ 70632799 (+) |
| G540249 | NA | non-coding | upstream | 68376 | 70628841 ~ 70629118 (+) |
| G540239 | NA | non-coding | upstream | 70352 | 70623833 ~ 70627142 (+) |
| G540237 | NA | non-coding | upstream | 88883 | 70608355 ~ 70608611 (+) |
| G540745 | NA | non-coding | downstream | 27254 | 70724992 ~ 70725227 (+) |
| G540771 | NA | non-coding | downstream | 47441 | 70745179 ~ 70745382 (+) |
| G540779 | NA | non-coding | downstream | 56658 | 70754396 ~ 70754614 (+) |
| G540883 | NA | non-coding | downstream | 157064 | 70854802 ~ 70855116 (+) |
| G540885 | NA | non-coding | downstream | 158138 | 70855876 ~ 70856103 (+) |
| G540179 | NA | other | upstream | 213126 | 70481950 ~ 70484368 (+) |
| G539959 | NA | other | upstream | 678017 | 70015270 ~ 70019477 (+) |
| G541903 | NA | other | downstream | 1102302 | 71800040 ~ 71804462 (+) |
| G542053 | NA | other | downstream | 1403642 | 72101380 ~ 72102474 (+) |
| G542100 | LOC106587475 | other | downstream | 1453282 | 72151020 ~ 72152394 (+) |
| saa | saa | other | downstream | 1967722 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 2067943 | 72765681 ~ 72766851 (+) |
