Gene
RNA
| Item | Value |
|---|---|
| gene id | G540884 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70854893 ~ 70855187 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_06569 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU612534 | True | 295 | lncRNA | 0.40 | 1 | 70854893 | 70855187 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526488 | LOC106562298 | coding | downstream | 188680 | 70623828 ~ 70666213 (-) |
| LOC110526960 | atmin | coding | downstream | 241505 | 70600001 ~ 70613388 (-) |
| LOC110526959 | LOC106587454 | coding | downstream | 261412 | 70592558 ~ 70593481 (-) |
| LOC118964928 | NA | coding | downstream | 298481 | 70527096 ~ 70556412 (-) |
| LOC118964927 | NA | coding | downstream | 351477 | 70498546 ~ 70503416 (-) |
| mafa | maf | coding | upstream | 160860 | 71016047 ~ 71136889 (-) |
| LOC110506109 | LOC106587443 | coding | upstream | 373260 | 71228447 ~ 71230405 (-) |
| LOC110526491 | LOC106587459 | coding | upstream | 413973 | 71269160 ~ 71307013 (-) |
| syt9a | LOC106587460 | coding | upstream | 478979 | 71334166 ~ 71375579 (-) |
| LOC110526494 | LOC106587461 | coding | upstream | 559255 | 71414442 ~ 71535063 (-) |
| G540882 | NA | non-coding | downstream | 2957 | 70851734 ~ 70851936 (-) |
| G540877 | NA | non-coding | downstream | 4832 | 70849747 ~ 70850061 (-) |
| G540868 | NA | non-coding | downstream | 17490 | 70836979 ~ 70837403 (-) |
| G540769 | NA | non-coding | downstream | 110771 | 70743889 ~ 70744122 (-) |
| G540757 | NA | non-coding | downstream | 121204 | 70733421 ~ 70733689 (-) |
| G540897 | NA | non-coding | upstream | 16737 | 70871924 ~ 70872149 (-) |
| G541167 | NA | non-coding | upstream | 24166 | 70879353 ~ 71185122 (-) |
| G541249 | NA | non-coding | upstream | 138286 | 70993473 ~ 71002715 (-) |
| G541347 | NA | non-coding | upstream | 330631 | 71185818 ~ 71186120 (-) |
| G541348 | NA | non-coding | upstream | 331753 | 71186940 ~ 71187213 (-) |
| G540376 | NA | other | downstream | 747718 | 70103798 ~ 70107175 (-) |
| G539714 | NA | other | downstream | 1164878 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 1238574 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 1565397 | 69272988 ~ 69289496 (-) |
| G541798 | NA | other | upstream | 754344 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 1745088 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 1804269 | 72659456 ~ 72666713 (-) |
| G543224 | LOC106587514 | other | upstream | 1954590 | 72809777 ~ 72810172 (-) |
| G543313 | LOC106587506 | other | upstream | 2142341 | 72997528 ~ 73020000 (-) |
