Gene
RNA
| Item | Value |
|---|---|
| gene id | G540897 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 70871924 ~ 70872149 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU612547 | True | 226 | lncRNA | 0.48 | 1 | 70871924 | 70872149 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526488 | LOC106562298 | coding | downstream | 205711 | 70623828 ~ 70666213 (-) |
| LOC110526960 | atmin | coding | downstream | 258536 | 70600001 ~ 70613388 (-) |
| LOC110526959 | LOC106587454 | coding | downstream | 278443 | 70592558 ~ 70593481 (-) |
| LOC118964928 | NA | coding | downstream | 315512 | 70527096 ~ 70556412 (-) |
| LOC118964927 | NA | coding | downstream | 368508 | 70498546 ~ 70503416 (-) |
| mafa | maf | coding | upstream | 143898 | 71016047 ~ 71136889 (-) |
| LOC110506109 | LOC106587443 | coding | upstream | 356298 | 71228447 ~ 71230405 (-) |
| LOC110526491 | LOC106587459 | coding | upstream | 397011 | 71269160 ~ 71307013 (-) |
| syt9a | LOC106587460 | coding | upstream | 462017 | 71334166 ~ 71375579 (-) |
| LOC110526494 | LOC106587461 | coding | upstream | 542293 | 71414442 ~ 71535063 (-) |
| G540884 | NA | non-coding | downstream | 16737 | 70854893 ~ 70855187 (-) |
| G540882 | NA | non-coding | downstream | 19988 | 70851734 ~ 70851936 (-) |
| G540877 | NA | non-coding | downstream | 21863 | 70849747 ~ 70850061 (-) |
| G540868 | NA | non-coding | downstream | 34521 | 70836979 ~ 70837403 (-) |
| G540769 | NA | non-coding | downstream | 127802 | 70743889 ~ 70744122 (-) |
| G541167 | NA | non-coding | upstream | 7204 | 70879353 ~ 71185122 (-) |
| G541249 | NA | non-coding | upstream | 121324 | 70993473 ~ 71002715 (-) |
| G541347 | NA | non-coding | upstream | 313669 | 71185818 ~ 71186120 (-) |
| G541348 | NA | non-coding | upstream | 314791 | 71186940 ~ 71187213 (-) |
| G541349 | NA | non-coding | upstream | 317886 | 71190035 ~ 71190338 (-) |
| G540376 | NA | other | downstream | 764749 | 70103798 ~ 70107175 (-) |
| G539714 | NA | other | downstream | 1181909 | 69688907 ~ 69690015 (-) |
| G539674 | LOC106587381 | other | downstream | 1255605 | 69615754 ~ 69616671 (-) |
| LOC110526462 | NA | other | downstream | 1582428 | 69272988 ~ 69289496 (-) |
| G541798 | NA | other | upstream | 737382 | 71609531 ~ 71613840 (-) |
| G543091 | NA | other | upstream | 1728126 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | upstream | 1787307 | 72659456 ~ 72666713 (-) |
| G543224 | LOC106587514 | other | upstream | 1937628 | 72809777 ~ 72810172 (-) |
| G543313 | LOC106587506 | other | upstream | 2125379 | 72997528 ~ 73020000 (-) |
