G541766


Basic Information

Item Value
gene id G541766
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 71587102 ~ 71587523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU613459
gcttaccaggctggggagacatgctggaggcctggtacgtggaatcggaacaggtctcaccggactggggagatgcactggaagcctggtgcgtggagcaggcaccggatacactgggccgtggaggcacactggaggtctAAAGCGTAGAGCTGGCATCCAGCCATCCTGGACGGGCCCGTCTAGCCCGtccaaaaacaagacaagacaaaaacaagacaagacaaaaacaagacaagtcaaaaacaagacaagacaagacaagacaaaaacactgTGCActtcacggcataacacggtccctgaccagtaccacgctccCTACCGTGAGCACGGGGAGTTAGCTCCGCCAGCCTCCCCGTGTGACCCCAAATTGTTTGGGGGGGGAGTGGCTTCCCAGTCTTCCTTGCCAGCCTTGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU613459 True 422 lncRNA 0.57 1 71587102 71587523

Neighbor

gene id symbol gene type direction distance location
cmc2 cmc2 coding upstream 965592 70615476 ~ 70621510 (+)
si:ch73-103b9.2 cssa26h16orf46 coding upstream 987914 70594747 ~ 70599188 (+)
LOC110526485 fam92b coding upstream 1029004 70551763 ~ 70558098 (+)
LOC110526484 LOC106587367 coding upstream 1529039 70049150 ~ 70058063 (+)
LOC110525047 psf2 coding upstream 1548645 70036194 ~ 70039507 (+)
LOC110526495 LOC106587464 coding downstream 94078 71681601 ~ 71690360 (+)
LOC118964930 NA coding downstream 374401 71961924 ~ 71967802 (+)
LOC110526507 LOC106587468 coding downstream 423572 72011095 ~ 72021875 (+)
LOC110526509 LOC106563533 coding downstream 486627 72074150 ~ 72098245 (+)
LOC110526510 pkp3 coding downstream 530215 72117738 ~ 72135463 (+)
G541754 NA non-coding upstream 8602 71578254 ~ 71578500 (+)
G541741 NA non-coding upstream 21382 71565512 ~ 71565720 (+)
G541731 NA non-coding upstream 27247 71559578 ~ 71559855 (+)
G541547 NA non-coding upstream 180763 71406124 ~ 71406339 (+)
G541546 NA non-coding upstream 181889 71404970 ~ 71405213 (+)
G541785 NA non-coding downstream 13904 71601427 ~ 71601719 (+)
G541788 NA non-coding downstream 16772 71604295 ~ 71604827 (+)
G541794 NA non-coding downstream 21824 71609347 ~ 71613696 (+)
G541800 NA non-coding downstream 28415 71615938 ~ 71616217 (+)
G541821 NA non-coding downstream 42965 71630488 ~ 71630879 (+)
G540179 NA other upstream 1102734 70481950 ~ 70484368 (+)
G539959 NA other upstream 1567625 70015270 ~ 70019477 (+)
G541903 NA other downstream 212517 71800040 ~ 71804462 (+)
G542053 NA other downstream 513857 72101380 ~ 72102474 (+)
G542100 LOC106587475 other downstream 563497 72151020 ~ 72152394 (+)
saa saa other downstream 1077937 72665460 ~ 72666872 (+)
G542890 NA other downstream 1178158 72765681 ~ 72766851 (+)

Expression


Co-expression Network