Gene
RNA
| Item | Value |
|---|---|
| gene id | G541894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 71692160 ~ 71692463 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU613598 | True | 304 | lncRNA | 0.41 | 1 | 71692160 | 71692463 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526495 | LOC106587464 | coding | upstream | 1800 | 71681601 ~ 71690360 (+) |
| cmc2 | cmc2 | coding | upstream | 1070650 | 70615476 ~ 70621510 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | upstream | 1092972 | 70594747 ~ 70599188 (+) |
| LOC110526485 | fam92b | coding | upstream | 1134062 | 70551763 ~ 70558098 (+) |
| LOC110526484 | LOC106587367 | coding | upstream | 1634097 | 70049150 ~ 70058063 (+) |
| LOC118964930 | NA | coding | downstream | 269461 | 71961924 ~ 71967802 (+) |
| LOC110526507 | LOC106587468 | coding | downstream | 318632 | 72011095 ~ 72021875 (+) |
| LOC110526509 | LOC106563533 | coding | downstream | 381687 | 72074150 ~ 72098245 (+) |
| LOC110526510 | pkp3 | coding | downstream | 425275 | 72117738 ~ 72135463 (+) |
| LOC110526514 | LOC106563530 | coding | downstream | 464727 | 72157190 ~ 72181309 (+) |
| G541892 | NA | non-coding | upstream | 111 | 71690783 ~ 71692049 (+) |
| G541821 | NA | non-coding | upstream | 61281 | 71630488 ~ 71630879 (+) |
| G541800 | NA | non-coding | upstream | 75943 | 71615938 ~ 71616217 (+) |
| G541794 | NA | non-coding | upstream | 78464 | 71609347 ~ 71613696 (+) |
| G541788 | NA | non-coding | upstream | 87333 | 71604295 ~ 71604827 (+) |
| G541904 | NA | non-coding | downstream | 21437 | 71713900 ~ 71807250 (+) |
| G541913 | NA | non-coding | downstream | 42402 | 71734865 ~ 71943278 (+) |
| G541914 | NA | non-coding | downstream | 44821 | 71737284 ~ 71740884 (+) |
| G541915 | LOC106595537 | non-coding | downstream | 50456 | 71742919 ~ 71750118 (+) |
| G541931 | NA | non-coding | downstream | 132000 | 71824463 ~ 71939776 (+) |
| G540179 | NA | other | upstream | 1207792 | 70481950 ~ 70484368 (+) |
| LOC110525047 | psf2 | other | upstream | 1652653 | 70036194 ~ 70039507 (+) |
| G539959 | NA | other | upstream | 1672683 | 70015270 ~ 70019477 (+) |
| G541903 | NA | other | downstream | 107577 | 71800040 ~ 71804462 (+) |
| G542053 | NA | other | downstream | 408917 | 72101380 ~ 72102474 (+) |
| G542100 | LOC106587475 | other | downstream | 458557 | 72151020 ~ 72152394 (+) |
| saa | saa | other | downstream | 972997 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 1073218 | 72765681 ~ 72766851 (+) |
