Gene
RNA
| Item | Value |
|---|---|
| gene id | G542010 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 71976616 ~ 71976941 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU613759 | True | 326 | lncRNA | 0.33 | 1 | 71976616 | 71976941 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964930 | NA | coding | upstream | 8814 | 71961924 ~ 71967802 (+) |
| LOC110526495 | LOC106587464 | coding | upstream | 286256 | 71681601 ~ 71690360 (+) |
| cmc2 | cmc2 | coding | upstream | 1355106 | 70615476 ~ 70621510 (+) |
| si:ch73-103b9.2 | cssa26h16orf46 | coding | upstream | 1377428 | 70594747 ~ 70599188 (+) |
| LOC110526485 | fam92b | coding | upstream | 1418518 | 70551763 ~ 70558098 (+) |
| LOC110526507 | LOC106587468 | coding | downstream | 34154 | 72011095 ~ 72021875 (+) |
| LOC110526509 | LOC106563533 | coding | downstream | 97209 | 72074150 ~ 72098245 (+) |
| LOC110526510 | pkp3 | coding | downstream | 140797 | 72117738 ~ 72135463 (+) |
| LOC110526514 | LOC106563530 | coding | downstream | 180249 | 72157190 ~ 72181309 (+) |
| LOC110526515 | LOC106587477 | coding | downstream | 208131 | 72185072 ~ 72207042 (+) |
| G542009 | NA | non-coding | upstream | 1098 | 71975196 ~ 71975518 (+) |
| G542006 | NA | non-coding | upstream | 5714 | 71970397 ~ 71970902 (+) |
| G542005 | NA | non-coding | upstream | 7827 | 71968582 ~ 71968789 (+) |
| G541993 | NA | non-coding | upstream | 25582 | 71950694 ~ 71951034 (+) |
| G542011 | NA | non-coding | downstream | 273 | 71977214 ~ 71977481 (+) |
| G542021 | NA | non-coding | downstream | 24075 | 72001016 ~ 72001221 (+) |
| G542022 | NA | non-coding | downstream | 24975 | 72001916 ~ 72002219 (+) |
| G542092 | NA | non-coding | downstream | 164575 | 72141516 ~ 72142559 (+) |
| G542137 | NA | non-coding | downstream | 297375 | 72274316 ~ 72292811 (+) |
| G541903 | NA | other | upstream | 172154 | 71800040 ~ 71804462 (+) |
| G540179 | NA | other | upstream | 1492248 | 70481950 ~ 70484368 (+) |
| LOC110525047 | psf2 | other | upstream | 1937109 | 70036194 ~ 70039507 (+) |
| G542053 | NA | other | downstream | 124439 | 72101380 ~ 72102474 (+) |
| G542100 | LOC106587475 | other | downstream | 174079 | 72151020 ~ 72152394 (+) |
| saa | saa | other | downstream | 688519 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 788740 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 1061680 | 73037953 ~ 73182742 (+) |
