Gene
RNA
| Item | Value |
|---|---|
| gene id | G542092 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72141516 ~ 72142559 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| anoctamin-9-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU613861 | True | 590 | lncRNA | 0.44 | 2 | 72141516 | 72142559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526510 | pkp3 | coding | upstream | 6053 | 72117738 ~ 72135463 (+) |
| LOC110526509 | LOC106563533 | coding | upstream | 43271 | 72074150 ~ 72098245 (+) |
| LOC110526507 | LOC106587468 | coding | upstream | 119641 | 72011095 ~ 72021875 (+) |
| LOC118964930 | NA | coding | upstream | 173714 | 71961924 ~ 71967802 (+) |
| LOC110526495 | LOC106587464 | coding | upstream | 451156 | 71681601 ~ 71690360 (+) |
| LOC110526514 | LOC106563530 | coding | downstream | 14631 | 72157190 ~ 72181309 (+) |
| LOC110526515 | LOC106587477 | coding | downstream | 42513 | 72185072 ~ 72207042 (+) |
| LOC110526517 | LOC106587478 | coding | downstream | 78789 | 72221348 ~ 72244464 (+) |
| LOC100136249 | LOC100136249 | coding | downstream | 144472 | 72287031 ~ 72294897 (+) |
| mybpc3 | LOC106587482 | coding | downstream | 155434 | 72297993 ~ 72339964 (+) |
| G542022 | NA | non-coding | upstream | 139297 | 72001916 ~ 72002219 (+) |
| G542021 | NA | non-coding | upstream | 140295 | 72001016 ~ 72001221 (+) |
| G542011 | NA | non-coding | upstream | 164035 | 71977214 ~ 71977481 (+) |
| G542010 | NA | non-coding | upstream | 164575 | 71976616 ~ 71976941 (+) |
| G542009 | NA | non-coding | upstream | 165998 | 71975196 ~ 71975518 (+) |
| G542137 | NA | non-coding | downstream | 131757 | 72274316 ~ 72292811 (+) |
| G542162 | NA | non-coding | downstream | 154185 | 72296744 ~ 72296989 (+) |
| G542131 | LOC106587483 | non-coding | downstream | 199353 | 72341912 ~ 72343982 (+) |
| G542179 | NA | non-coding | downstream | 202378 | 72344937 ~ 72345730 (+) |
| G542180 | NA | non-coding | downstream | 204268 | 72346827 ~ 72347198 (+) |
| G542053 | NA | other | upstream | 39042 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 337054 | 71800040 ~ 71804462 (+) |
| cmc2 | cmc2 | other | upstream | 1520042 | 70615476 ~ 70621510 (+) |
| LOC110526485 | fam92b | other | upstream | 1587596 | 70551763 ~ 70558098 (+) |
| G540179 | NA | other | upstream | 1657148 | 70481950 ~ 70484368 (+) |
| G542100 | LOC106587475 | other | downstream | 8461 | 72151020 ~ 72152394 (+) |
| saa | saa | other | downstream | 522901 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 623122 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 896062 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 1230246 | 73190979 ~ 73392251 (+) |
