Gene
RNA
| Item | Value |
|---|---|
| gene id | G542137 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72274316 ~ 72292811 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU613914 | True | 1949 | lncRNA | 0.36 | 2 | 72274316 | 72292811 |
72,254,000
72,256,000
72,258,000
72,260,000
72,262,000
72,264,000
72,266,000
72,268,000
72,270,000
72,272,000
72,274,000
72,276,000
72,278,000
72,280,000
72,282,000
72,284,000
72,286,000
72,288,000
72,290,000
72,292,000
72,294,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526517 | LOC106587478 | coding | upstream | 29852 | 72221348 ~ 72244464 (+) |
| LOC110526515 | LOC106587477 | coding | upstream | 67274 | 72185072 ~ 72207042 (+) |
| LOC110526514 | LOC106563530 | coding | upstream | 93007 | 72157190 ~ 72181309 (+) |
| LOC110526510 | pkp3 | coding | upstream | 138853 | 72117738 ~ 72135463 (+) |
| LOC110526509 | LOC106563533 | coding | upstream | 176071 | 72074150 ~ 72098245 (+) |
| mybpc3 | LOC106587482 | coding | downstream | 5182 | 72297993 ~ 72339964 (+) |
| LOC118965108 | NA | coding | downstream | 39825 | 72332636 ~ 72332690 (+) |
| LOC110526523 | LOC106587484 | coding | downstream | 278006 | 72570817 ~ 72595606 (+) |
| LOC110526524 | LOC106587487 | coding | downstream | 320884 | 72613695 ~ 72631381 (+) |
| LOC110526527 | lin7c | coding | downstream | 339970 | 72632781 ~ 72638350 (+) |
| G542092 | NA | non-coding | upstream | 131757 | 72141516 ~ 72142559 (+) |
| G542022 | NA | non-coding | upstream | 272097 | 72001916 ~ 72002219 (+) |
| G542021 | NA | non-coding | upstream | 273095 | 72001016 ~ 72001221 (+) |
| G542011 | NA | non-coding | upstream | 296835 | 71977214 ~ 71977481 (+) |
| G542010 | NA | non-coding | upstream | 297375 | 71976616 ~ 71976941 (+) |
| G542162 | NA | non-coding | downstream | 3933 | 72296744 ~ 72296989 (+) |
| G542131 | LOC106587483 | non-coding | downstream | 49101 | 72341912 ~ 72343982 (+) |
| G542179 | NA | non-coding | downstream | 52126 | 72344937 ~ 72345730 (+) |
| G542180 | NA | non-coding | downstream | 54016 | 72346827 ~ 72347198 (+) |
| G542181 | NA | non-coding | downstream | 54639 | 72347450 ~ 72348095 (+) |
| G542100 | LOC106587475 | other | upstream | 121922 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 171842 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 469854 | 71800040 ~ 71804462 (+) |
| cmc2 | cmc2 | other | upstream | 1652842 | 70615476 ~ 70621510 (+) |
| LOC110526485 | fam92b | other | upstream | 1720396 | 70551763 ~ 70558098 (+) |
| saa | saa | other | downstream | 372649 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 472870 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 745810 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 1079994 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1994967 | 74287778 ~ 74288138 (+) |
