Gene
RNA
| Item | Value |
|---|---|
| gene id | G542181 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72347450 ~ 72348095 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU613962 | True | 646 | lncRNA | 0.42 | 1 | 72347450 | 72348095 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mybpc3 | LOC106587482 | coding | upstream | 7486 | 72297993 ~ 72339964 (+) |
| LOC118965108 | NA | coding | upstream | 14760 | 72332636 ~ 72332690 (+) |
| LOC100136249 | LOC100136249 | coding | upstream | 52553 | 72287031 ~ 72294897 (+) |
| LOC110526517 | LOC106587478 | coding | upstream | 102986 | 72221348 ~ 72244464 (+) |
| LOC110526515 | LOC106587477 | coding | upstream | 140408 | 72185072 ~ 72207042 (+) |
| LOC110526523 | LOC106587484 | coding | downstream | 222722 | 72570817 ~ 72595606 (+) |
| LOC110526524 | LOC106587487 | coding | downstream | 265600 | 72613695 ~ 72631381 (+) |
| LOC110526527 | lin7c | coding | downstream | 284686 | 72632781 ~ 72638350 (+) |
| LOC110526528 | LOC106587490 | coding | downstream | 293656 | 72641751 ~ 72643688 (+) |
| frih | frih | coding | downstream | 306340 | 72654435 ~ 72658903 (+) |
| G542180 | NA | non-coding | upstream | 252 | 72346827 ~ 72347198 (+) |
| G542179 | NA | non-coding | upstream | 1720 | 72344937 ~ 72345730 (+) |
| G542131 | LOC106587483 | non-coding | upstream | 3468 | 72341912 ~ 72343982 (+) |
| G542162 | NA | non-coding | upstream | 50461 | 72296744 ~ 72296989 (+) |
| G542137 | NA | non-coding | upstream | 54639 | 72274316 ~ 72292811 (+) |
| G542183 | NA | non-coding | downstream | 1991 | 72350086 ~ 72350298 (+) |
| G542184 | NA | non-coding | downstream | 3441 | 72351536 ~ 72352091 (+) |
| G542186 | NA | non-coding | downstream | 6626 | 72354721 ~ 72355254 (+) |
| G542187 | NA | non-coding | downstream | 7482 | 72355577 ~ 72355845 (+) |
| G542188 | NA | non-coding | downstream | 8217 | 72356312 ~ 72356652 (+) |
| G542100 | LOC106587475 | other | upstream | 195056 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 244976 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 542988 | 71800040 ~ 71804462 (+) |
| cmc2 | cmc2 | other | upstream | 1725976 | 70615476 ~ 70621510 (+) |
| LOC110526485 | fam92b | other | upstream | 1793530 | 70551763 ~ 70558098 (+) |
| saa | saa | other | downstream | 317365 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 417586 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 690526 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 1024710 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1939683 | 74287778 ~ 74288138 (+) |
