Gene
RNA
| Item | Value |
|---|---|
| gene id | G542184 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72351536 ~ 72352091 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU613965 | True | 556 | lncRNA | 0.43 | 1 | 72351536 | 72352091 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mybpc3 | LOC106587482 | coding | upstream | 11572 | 72297993 ~ 72339964 (+) |
| LOC118965108 | NA | coding | upstream | 18846 | 72332636 ~ 72332690 (+) |
| LOC100136249 | LOC100136249 | coding | upstream | 56639 | 72287031 ~ 72294897 (+) |
| LOC110526517 | LOC106587478 | coding | upstream | 107072 | 72221348 ~ 72244464 (+) |
| LOC110526515 | LOC106587477 | coding | upstream | 144494 | 72185072 ~ 72207042 (+) |
| LOC110526523 | LOC106587484 | coding | downstream | 218726 | 72570817 ~ 72595606 (+) |
| LOC110526524 | LOC106587487 | coding | downstream | 261604 | 72613695 ~ 72631381 (+) |
| LOC110526527 | lin7c | coding | downstream | 280690 | 72632781 ~ 72638350 (+) |
| LOC110526528 | LOC106587490 | coding | downstream | 289660 | 72641751 ~ 72643688 (+) |
| frih | frih | coding | downstream | 302344 | 72654435 ~ 72658903 (+) |
| G542183 | NA | non-coding | upstream | 1238 | 72350086 ~ 72350298 (+) |
| G542181 | NA | non-coding | upstream | 3441 | 72347450 ~ 72348095 (+) |
| G542180 | NA | non-coding | upstream | 4338 | 72346827 ~ 72347198 (+) |
| G542179 | NA | non-coding | upstream | 5806 | 72344937 ~ 72345730 (+) |
| G542131 | LOC106587483 | non-coding | upstream | 7554 | 72341912 ~ 72343982 (+) |
| G542186 | NA | non-coding | downstream | 2630 | 72354721 ~ 72355254 (+) |
| G542187 | NA | non-coding | downstream | 3486 | 72355577 ~ 72355845 (+) |
| G542188 | NA | non-coding | downstream | 4221 | 72356312 ~ 72356652 (+) |
| G542189 | NA | non-coding | downstream | 5432 | 72357523 ~ 72357919 (+) |
| G542194 | NA | non-coding | downstream | 13455 | 72365546 ~ 72365752 (+) |
| G542100 | LOC106587475 | other | upstream | 199142 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 249062 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 547074 | 71800040 ~ 71804462 (+) |
| cmc2 | cmc2 | other | upstream | 1730062 | 70615476 ~ 70621510 (+) |
| LOC110526485 | fam92b | other | upstream | 1797616 | 70551763 ~ 70558098 (+) |
| saa | saa | other | downstream | 313369 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 413590 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 686530 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 1020714 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1935687 | 74287778 ~ 74288138 (+) |
