Gene
RNA
| Item | Value |
|---|---|
| gene id | G542250 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72448348 ~ 72455351 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU614033 | False | 228 | lncRNA | 0.41 | 2 | 72448348 | 72455351 |
| TU614032 | True | 251 | lncRNA | 0.39 | 2 | 72450591 | 72455351 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mybpc3 | LOC106587482 | coding | upstream | 108384 | 72297993 ~ 72339964 (+) |
| LOC118965108 | NA | coding | upstream | 115658 | 72332636 ~ 72332690 (+) |
| LOC100136249 | LOC100136249 | coding | upstream | 153451 | 72287031 ~ 72294897 (+) |
| LOC110526517 | LOC106587478 | coding | upstream | 203884 | 72221348 ~ 72244464 (+) |
| LOC110526515 | LOC106587477 | coding | upstream | 241306 | 72185072 ~ 72207042 (+) |
| LOC110526523 | LOC106587484 | coding | downstream | 115466 | 72570817 ~ 72595606 (+) |
| LOC110526524 | LOC106587487 | coding | downstream | 158344 | 72613695 ~ 72631381 (+) |
| LOC110526527 | lin7c | coding | downstream | 177430 | 72632781 ~ 72638350 (+) |
| LOC110526528 | LOC106587490 | coding | downstream | 186400 | 72641751 ~ 72643688 (+) |
| frih | frih | coding | downstream | 199084 | 72654435 ~ 72658903 (+) |
| G542202 | NA | non-coding | upstream | 72748 | 72375273 ~ 72375600 (+) |
| G542198 | NA | non-coding | upstream | 79761 | 72367882 ~ 72368587 (+) |
| G542197 | NA | non-coding | upstream | 80670 | 72367322 ~ 72367678 (+) |
| G542196 | NA | non-coding | upstream | 81251 | 72366823 ~ 72367097 (+) |
| G542195 | NA | non-coding | upstream | 82155 | 72365875 ~ 72366193 (+) |
| G542741 | NA | non-coding | downstream | 140393 | 72595744 ~ 72595981 (+) |
| G542742 | NA | non-coding | downstream | 141022 | 72596373 ~ 72596662 (+) |
| G542781 | NA | non-coding | downstream | 143804 | 72599155 ~ 72599398 (+) |
| LOC110526531 | LOC106587514 | non-coding | downstream | 252899 | 72708156 ~ 72815720 (+) |
| G542860 | NA | non-coding | downstream | 260951 | 72716302 ~ 72721047 (+) |
| G542100 | LOC106587475 | other | upstream | 295954 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 345874 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 643886 | 71800040 ~ 71804462 (+) |
| cmc2 | cmc2 | other | upstream | 1826874 | 70615476 ~ 70621510 (+) |
| LOC110526485 | fam92b | other | upstream | 1894428 | 70551763 ~ 70558098 (+) |
| saa | saa | other | downstream | 210109 | 72665460 ~ 72666872 (+) |
| G542890 | NA | other | downstream | 310330 | 72765681 ~ 72766851 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 583270 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 917454 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1832427 | 74287778 ~ 74288138 (+) |
