G543092


Basic Information

Item Value
gene id G543092
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 72659456 ~ 72666713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU615000
GTCTCTGGTTGTGTAATCACTTTATTTTTGCAACACTTTTGAAATACATTGTATACTATGTTTCAGTACCATGTACCTGTCTATTAGCAGAAATCATTTTTGAGAATATGACATTTTTACCAAAAGCAGTAATTAAGTGCAATATGTTTGTTTGGAATTTGGTCCTTCAGTTTGGCTAGTAACCTCCTTTTTGTAGGTTCAGTAGTTCTTGGGGAGTCCTTGGGGTCTGAATCGGTTGGGGTCCCCTCCATTACGTCCCCAGTGGTTAGCCTTCTGGTCAGCTGCTGAGTCCTCGTGTCCTCGACCATTGGAACCCTGAATCATCTCCCGGCcattaCTGATGACTGTTGCTGCCCACCTGCCCCCTGGTCCTCTCCTGGCAGCATCATAGTTGCCCCGAGCGTGAAAGTACTTGTCTGAGTTTTTCCAGTTGGCGTCCTTCATGTCGCCATATGCACGCCACATGTCTTTAGCACCTTGAGCAGCTTCACCAGGGAAGCGGTACCACTGAGCTTGAGCTCCTACAACGAGGGTCAGAACAAGTCCAGCTAGAAGCAGCTTCATACTTGCAGATGCGACAAACTTCTAGCTCcttagttagttagtcagtcaggCAGTTTGAACTCCCTTGTGTTTTGTGTTGGTTTGTGGTCTGCAGCTTGTTCTTATATTCCACTCAGACCAGGGAGGAGTTCTGTTTTTCCAAAAGCTGGAATTCCCTAACTTCGTCCTCCCAAGCTATTACGATCAGAAGTGTATGCCCGGGAACACAAGATGAGAAATTTCCAGGTCATGACAAGATGAATTAGAGGACGTGCTCTGAAGCCTTGGGCAATAAGGAGGATACTCCTCAATTGTGTAACTAGGCCTACAGCTTAAAAAAACAAGGCATCAAAATGTGATGTGTCTGTATTAATAAGACTAATGGGGGAGCAGTTTGTTTTTCTGCTTTTAATGTCGTAATTGTCATGATGGTTGAGGTTCCAAAAGTTTGCCTCTCACCTAATATGAGAGAATGAATCCTTATGATATGATTCattatagactactataatagggTAGAATACAGGTATTTAATAGACATAGACATTAAAGGCAATTTGCATGTCCAAATCTTACAGTTGGCACCTTTATCTTACGGGTTACACAATTACTGCTCCCCCTCACACCTatgctgctgttcattgattattgCTTGCCTttaccattagtatctatttacagttgaagaaggaagtttacatacacttaggttggagtcattaaaactcgtttttcaaccactccacacatttcttgttaataaactatagttttacAAGTTGATTAGGacataattttccaacaattgtttacagacagattatttaacttataattaactgtagcacaattccagtgggtcagaagtttccatacactaagttgactgtgtcttttaaacaacttggaaaattccagaaaatgatgtcatggcttttgaagcttttgatagggtaattgacataatttgagtcaattggaggtgtacctgtggatgtatttcaaggcctaccttcaaactctgtgcctctttgcttgacatcgtgggaaaatcaaaagttatcagccaagacctcagaaaacaaattgtagacctccacaagtcttgttcatccttgggaggaatgtccaaatgcctgaaggtaccacattcatctgtacaaacaatagtacacaagtataaacaccatggaaccacacagccgtcataccgctcaggaaggagacgcgttctgtctcctagatgaacgtactttgttgtgaaaagtgaaaatcaatcgcagaacaacagcaaaggaccttgtgaagatgctggaggaaacaggtacaaaagtatctatatccacagcaaaacgagtcatatatcgacataacctgaaaggccgctcagcaaggaagaagccactgctccaaaaccgccataaaaaagccagactacggtttgtaactgcacatggggacaaagatcgtactttttgaagaaatgtcctctggtctgatgaaacaaaaatagaacagtttggccttaatgaacatcgttatgtttggaggtaaaaggggAAGTTTGCaagcccgaagaacaccatcccaaatgtgaagcacaggggtggcagcatcatgttgtggggatgctttgttgcaggagggacgaggcatttcacaaaatagttggcatcatgaggatggaacatTATGTGGGTATTTTGaagatctcaagacatcaatcaggaagttaaagcttggtcgcaaatgggtcttccaaatggaaaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggtcaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcccatagaaaaagtgtgggcagaactgaaaaagcgtgtacgagcaagggaggcctgcaaacctgactcagttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacctggaatgtttgacccaagtgaatcaatttaaatgcaatgctaccaaaaactaattgagtgtatgtaaacttctgacccactgggaatgtgatgaaagaaataaaagcgtaaataaatcattctactattattctgacatttcacattcttaaaataaagtggtgatcctaactgacctaaaacaggaattttttactaggatttaatgtcaggaattgtgaaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttttgacttcaacatTATTCATCCTGCTACTGGTCACAATTACTCTTGTttacaaataaaaatctatttttattggttgcatacatatatttagcagatgttttgcgggtgtagcaaaatgcttgtgttaatatctccagcagtgcagtaatatctaacaatttacaacaatacacacagatctaaaagtaaaagaatggaattaagaaatataaaaATGATACGACAAGCAATGAGTCCatagtgtaaatatatatatgtgtgtgtgatgggatgtatagacattttGGACGgtatgtggatagaatattttgaaaatctgtagaatacagatgttctgaaagagctgcaaagtcTGGATCCCTAAAATCAGATGGGCTAGAAAATCTGGACTCTCTCCCTCTAAAATTATCAGCTGaaaatgttgcaacccctattactagcttgttcaacctctctttcgtatcgtctgagatccaacaaagattggaaagctgccccggtcatccccctcttcaaagggggagaccctctagacccaaactgttataaacctatatccatcctgccctgcctttctaaaatcttcaaaagccaagttaacaaacagatcacagaccatttcaaatcccaccgtacctttgccactatgcaatctggtttcctagctagtcatgggtgcacctcagccacgctcaacgtcctaaacaatatcataaccgccattgataaaagacagtactgtgcagccgtcttcatcgacctggccaaggcttttgactctgtcaatcaccgcattcttatcggcagattcaatagccttggtttctcaaatgactgcctcgcctggttcactctccttccagactcacatcaaacatctccaatccaaaattaaatctagaattggcttactatttcacaacaaagcctccttcattcatgctgccaaacataccctcgtaaaactgactatcccacAGATCCTTGACTACACAATGTAATTtctaaaatagcctccaacactctactcagcaaattggatgtagtctatcacagtgccatccgttttgtcaccaaagccccatatactacccaccactgcgacctgtatgctctcgttggctggccctcgctccatattcgtcgccaaacccactggctccaggtcatctataagtctttgctaggtaaagccctgccttagctcactggttaccatagcaacacccaaccgtagcacgtgctccagcaggtatatcccgtttgcgctgttctgtgaaggtagtacacagcgttgtatgagatcttcagtttcttggcaatttcttgcatggaaagccttaatttctcagaacaagaatagactgacgagtttcagaagaaagttaattgtttctggccattttgagcctgtaatcaaactcacaaatgctgatgctccagatactcaactagtccaaagaaggccagttttattgctacttttatcagaacaacagttttctgctgtgctaacataattgcaaaaggtttttataatgatcaattagccttggattagttaacacaacatgccattggaacaccggagtgatggttgctgataatgggcctctgtacacctatctagatattccataaaaagatcagccgtttccagctacaatagtcatttacaacattaacaatgtctacactgtatttctgatcaatttgatgttattttaatggacaaaaaatgtgtttttctttcaaaaataaggacgtttctaagtgaccccaaacttttgaactgtagtgtttgtgtgtgtgtgtgtatgtatatatgtccACACATATATGAACTGTACAAATGACACATTGGTGATCATAGATATTGAACCCTAGATAGGATGATGTCATAGACCCACTACACTAAGGGCAGGGTTGGgtagtaacagattacatgtaatctatCACACCCgtttcgagggcattatcacttaaattaatacctgctctttccgtgacatagactgaccaggtaaaataCATGAACCCTCattgatatcacttgttaaatccacctcaatcagtgtagatgaatacGAGGAAACCGGTTAATTAAAcaagtatttttaagccttgagacaattgaaacaagacaaaagatttaagtgccttttaacAGGGTATGAAAgaaggtgccaggcacaccgttttgtgtcaagaactacaacactgctgggtttttcaagcttaaccctttcccatgtgtatcaagaatgctccaccacccaaaggacatccaaccaacttgaaacaactgagggaagcattggtgtcaacatgggccggcatccctgtaacaccttgtagagtccgtgccccgacgaattgagactgttctgagggcaaaagggggggggtgttcttaatgttttgtacactcattggaggctgctgagggggggGACTCACAGTAATGGTTGGATTGGAGTCAATGGAAACCAcgtttggtaccattccatttactccattccagccattatgagccgtcctcactAGCTTACATAAACTAGATATCATTAGAATTCCTGTCTAGTGATGTCTACGACATCAATATAAAAAACACAAAGTAATATATCTATTCTGCAGGATACAAACACTCCATTCCAGCTAaaaaatggatatatagcgttttgccaCAAAACCTTTTAATATTCATCTCAAATCTTAATCCATAGCGAGGTTTCCATCAAATTTGCATGTGATTTATCTAAATATTCAAATCCGCATTAATAGAATCTGAGCCTACTCCCATCAGATAGACTTTTTGCAGATAAAATTCTGTGTATGATGTAGTGTACATTAAAAAAACTCGGTTAAATGTTAAATTGATTTATTACAATTTCAACTGATGGTTTTGTTACAAAAAATATTGAGTTAATATAGCAGATGTGCCCACTGGTATTGGCACACACACTAGTCAACAGCTCGtagatacagtgcgggtatagcctacatcagggatgggcaacttaaatgattgtgggggccacAACAAATCAGAATGAGTTCATGGACAGTGAGAGCATTTTTAATTGCCAAATGGCAGCCACGCATTGGGTGTTAATtttgtcaccagaataagacctaAACTGTATGCTTTCCAAAGTCGGAGGACCACACGTCATCTTGTGACTGCAAGATTACTTCGATATGGTTATTAAATCAATACGGTCACTTAAAAGCCTTTCCAACAGCATCTCTCGGGTGGGggggcagagtagcctagtggttagcgcgttggactagttacTAAAAGGTTGCGAGACTGAATCCCCGGGCTGTCAAGGTAATaatgttgttctgccccctgaacaaggcagttaacccacttcctACGCCATCatttaaaataatttgttcttaaatgatttGCCTAGTTAAGGTAAATAACATTTTACAAATAGAGGCCACCTCGTCTAGTGGTTAGTTTATTCAATATTTGGAAAATTTACAAATCTGGTGTTCCCATCAGGACGGTTGAGTAttttatccgacatgtacttcACATGCATCGAAAGGTTGTCTGGAAACCTGAGAAGGGTAACATTTTACTGAAAAGGTATCCATAAACATGAAAAATTGGTGTATAAAGCATGTGTGATCAACTGAGTTTAGTTTTAATATGTCATCTTATACCTCGtgtcatactcgttgccaaacccactggctccaggtcatctacaagaccctgctaggtaaaaaGTAATCCCTtagctcagctcactggtcaccatagcagcacccacctgtagcacatgctccagcaggcaTCTCTGGtcactctgcctctccttccagttctctgctgccaatgactggaacaaactacaataATCTCTGAAACacttctccctcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU615000 True 6724 TUCP 0.41 4 72659456 72666713

Neighbor

gene id symbol gene type direction distance location
LOC110526964 LOC106587485 coding downstream 130080 72504884 ~ 72529376 (-)
LOC110526521 LOC106587483 coding downstream 290781 72341021 ~ 72368675 (-)
LOC110526519 s39ad coding downstream 391724 72256687 ~ 72267732 (-)
LOC110526518 LOC106587479 coding downstream 408044 72244467 ~ 72251412 (-)
LOC110526513 LOC106587475 coding downstream 505020 72151010 ~ 72154436 (-)
LOC110526534 sdhaf2 coding upstream 156525 72823238 ~ 72826687 (-)
rpb10 NA coding upstream 163768 72830481 ~ 72831878 (-)
LOC110526535 NA coding upstream 166557 72833270 ~ 72837247 (-)
LOC110526538 LOC106587508 coding upstream 240861 72907574 ~ 72933603 (-)
LOC110526540 LOC106587507 coding upstream 335432 73002145 ~ 73007919 (-)
G543091 NA non-coding downstream 552 72600275 ~ 72721818 (-)
G542758 NA non-coding downstream 87854 72571079 ~ 72571602 (-)
G542694 NA non-coding downstream 137823 72519787 ~ 72521633 (-)
G542594 NA non-coding downstream 298097 72361092 ~ 72361359 (-)
G543161 NA non-coding upstream 50362 72717075 ~ 72718705 (-)
G543196 NA non-coding upstream 100198 72766911 ~ 72767200 (-)
G543201 NA non-coding upstream 109801 72776514 ~ 72776961 (-)
G543220 NA non-coding upstream 138017 72804730 ~ 72804952 (-)
G543221 NA non-coding upstream 138356 72805069 ~ 72805291 (-)
G541798 NA other downstream 1045616 71609531 ~ 71613840 (-)
LOC110526488 LOC106562298 other downstream 1993595 70623828 ~ 70666213 (-)
G540376 NA other downstream 2552281 70103798 ~ 70107175 (-)
G539714 NA other downstream 2969441 69688907 ~ 69690015 (-)
G539674 LOC106587381 other downstream 3043137 69615754 ~ 69616671 (-)
G543224 LOC106587514 other upstream 143064 72809777 ~ 72810172 (-)
G543313 LOC106587506 other upstream 330815 72997528 ~ 73020000 (-)
G543334 NA other upstream 362060 73028773 ~ 73029102 (-)
G543823 NA other upstream 895646 73562359 ~ 73562863 (-)

Expression

G543092 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 2.
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G543092 Expression in each Bioproject

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G543092 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network