Gene
RNA
| Item | Value |
|---|---|
| gene id | G542894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72779035 ~ 72780214 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU614770 | True | 1050 | lncRNA | 0.41 | 2 | 72779035 | 72780214 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526530 | LOC106587515 | coding | upstream | 76792 | 72691788 ~ 72702243 (+) |
| LOC118964931 | saa | coding | upstream | 88378 | 72689343 ~ 72690657 (+) |
| LOC110518525 | LOC106587448 | coding | upstream | 106357 | 72667865 ~ 72672678 (+) |
| saa | saa | coding | upstream | 112325 | 72665460 ~ 72666872 (+) |
| frih | frih | coding | upstream | 120132 | 72654435 ~ 72658903 (+) |
| LOC110526532 | LOC106562322 | coding | downstream | 46383 | 72826597 ~ 72830480 (+) |
| LOC110526536 | LOC106562320 | coding | downstream | 51770 | 72831984 ~ 72884038 (+) |
| LOC110526537 | ext2 | coding | downstream | 104263 | 72884477 ~ 72907006 (+) |
| LOC110526539 | LOC106587506 | coding | downstream | 209792 | 72990006 ~ 73001543 (+) |
| LOC110525049 | LOC106587503 | coding | downstream | 231503 | 73011717 ~ 73013424 (+) |
| G542891 | NA | non-coding | upstream | 11712 | 72766911 ~ 72767323 (+) |
| LOC110526531 | LOC106587514 | non-coding | upstream | 17144 | 72708156 ~ 72815720 (+) |
| G542860 | NA | non-coding | upstream | 57988 | 72716302 ~ 72721047 (+) |
| G542781 | NA | non-coding | upstream | 179637 | 72599155 ~ 72599398 (+) |
| G542742 | NA | non-coding | upstream | 182373 | 72596373 ~ 72596662 (+) |
| G542898 | NA | non-coding | downstream | 13004 | 72793218 ~ 72793696 (+) |
| G542901 | NA | non-coding | downstream | 23594 | 72803808 ~ 72804185 (+) |
| G542902 | NA | non-coding | downstream | 25189 | 72805403 ~ 72805604 (+) |
| G542905 | NA | non-coding | downstream | 39710 | 72819924 ~ 72820971 (+) |
| G542843 | sdhaf2 | non-coding | downstream | 43022 | 72823236 ~ 72826432 (+) |
| G542890 | NA | other | upstream | 12184 | 72765681 ~ 72766851 (+) |
| G542100 | LOC106587475 | other | upstream | 626641 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 676561 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 974573 | 71800040 ~ 71804462 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 258407 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 592591 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1507564 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 2457586 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 2641647 | 75421861 ~ 75422752 (+) |
