G542901


Basic Information

Item Value
gene id G542901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 72803808 ~ 72804185 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU614780
cggtaagctgctctgacagctaatgcttaaagttagagagggagatatgtctccagcttcagtgatttttgcaattcgtttcagtcattggcagtagagaactggaaggaattgcggccaaaggaggtgttggctttggggatgaccagtgaaatatacctgctggagcgcgtgctatgtgtgggtgttgctatggtgaccagtgagctgagataaggcagggctttacctagcaaagacttatagatgacctggagccaatgggtttggagacaaatatgtagcgagggccagccaacgagagcatacaggtcgcagtggtgggtagtatatggggctttggtgacaaaacggatggcactgtgatagacttcatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU614780 True 378 lncRNA 0.49 1 72803808 72804185

Neighbor

gene id symbol gene type direction distance location
LOC110526530 LOC106587515 coding upstream 101565 72691788 ~ 72702243 (+)
LOC118964931 saa coding upstream 113151 72689343 ~ 72690657 (+)
LOC110518525 LOC106587448 coding upstream 131130 72667865 ~ 72672678 (+)
saa saa coding upstream 137098 72665460 ~ 72666872 (+)
frih frih coding upstream 144905 72654435 ~ 72658903 (+)
LOC110526532 LOC106562322 coding downstream 22412 72826597 ~ 72830480 (+)
LOC110526536 LOC106562320 coding downstream 27799 72831984 ~ 72884038 (+)
LOC110526537 ext2 coding downstream 80292 72884477 ~ 72907006 (+)
LOC110526539 LOC106587506 coding downstream 185821 72990006 ~ 73001543 (+)
LOC110525049 LOC106587503 coding downstream 207532 73011717 ~ 73013424 (+)
G542898 NA non-coding upstream 10112 72793218 ~ 72793696 (+)
G542894 NA non-coding upstream 23594 72779035 ~ 72780214 (+)
G542891 NA non-coding upstream 36485 72766911 ~ 72767323 (+)
LOC110526531 LOC106587514 non-coding upstream 41917 72708156 ~ 72815720 (+)
G542860 NA non-coding upstream 82761 72716302 ~ 72721047 (+)
G542902 NA non-coding downstream 1218 72805403 ~ 72805604 (+)
G542905 NA non-coding downstream 15739 72819924 ~ 72820971 (+)
G542843 sdhaf2 non-coding downstream 19051 72823236 ~ 72826432 (+)
G542906 NA non-coding downstream 28319 72832504 ~ 72832731 (+)
G542916 NA non-coding downstream 47463 72851648 ~ 72852100 (+)
G542890 NA other upstream 36957 72765681 ~ 72766851 (+)
G542100 LOC106587475 other upstream 651414 72151020 ~ 72152394 (+)
G542053 NA other upstream 701334 72101380 ~ 72102474 (+)
G541903 NA other upstream 999346 71800040 ~ 71804462 (+)
LOC110526543 LOC106587517 other downstream 234436 73037953 ~ 73182742 (+)
LOC100136290 sox6 other downstream 568620 73190979 ~ 73392251 (+)
G544565 NA other downstream 1483593 74287778 ~ 74288138 (+)
G545485 NA other downstream 2433615 75237800 ~ 75238164 (+)
G545601 NA other downstream 2617676 75421861 ~ 75422752 (+)

Expression


Co-expression Network