G542902


Basic Information

Item Value
gene id G542902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 72805403 ~ 72805604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU614781
cataaataatcaataattatTTCAACCGGACCAAAGCTTCGTCAATAGAAAAAGAGAAACAAGAAAGGCGTGTTCCCAATCAGGCGCATGGCTGAtgtctggaaatttccactggccactgattgaaagtgctgcatctccctcatttttcagagtaaaagcctgaaacaatgcctaaagactggccacatgtagaagAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU614781 True 202 lncRNA 0.42 1 72805403 72805604

Neighbor

gene id symbol gene type direction distance location
LOC110526530 LOC106587515 coding upstream 103160 72691788 ~ 72702243 (+)
LOC118964931 saa coding upstream 114746 72689343 ~ 72690657 (+)
LOC110518525 LOC106587448 coding upstream 132725 72667865 ~ 72672678 (+)
saa saa coding upstream 138693 72665460 ~ 72666872 (+)
frih frih coding upstream 146500 72654435 ~ 72658903 (+)
LOC110526532 LOC106562322 coding downstream 20993 72826597 ~ 72830480 (+)
LOC110526536 LOC106562320 coding downstream 26380 72831984 ~ 72884038 (+)
LOC110526537 ext2 coding downstream 78873 72884477 ~ 72907006 (+)
LOC110526539 LOC106587506 coding downstream 184402 72990006 ~ 73001543 (+)
LOC110525049 LOC106587503 coding downstream 206113 73011717 ~ 73013424 (+)
G542901 NA non-coding upstream 1218 72803808 ~ 72804185 (+)
G542898 NA non-coding upstream 11707 72793218 ~ 72793696 (+)
G542894 NA non-coding upstream 25189 72779035 ~ 72780214 (+)
G542891 NA non-coding upstream 38080 72766911 ~ 72767323 (+)
LOC110526531 LOC106587514 non-coding upstream 43512 72708156 ~ 72815720 (+)
G542905 NA non-coding downstream 14320 72819924 ~ 72820971 (+)
G542843 sdhaf2 non-coding downstream 17632 72823236 ~ 72826432 (+)
G542906 NA non-coding downstream 26900 72832504 ~ 72832731 (+)
G542916 NA non-coding downstream 46044 72851648 ~ 72852100 (+)
G542994 NA non-coding downstream 181652 72987256 ~ 72987462 (+)
G542890 NA other upstream 38552 72765681 ~ 72766851 (+)
G542100 LOC106587475 other upstream 653009 72151020 ~ 72152394 (+)
G542053 NA other upstream 702929 72101380 ~ 72102474 (+)
G541903 NA other upstream 1000941 71800040 ~ 71804462 (+)
LOC110526543 LOC106587517 other downstream 233017 73037953 ~ 73182742 (+)
LOC100136290 sox6 other downstream 567201 73190979 ~ 73392251 (+)
G544565 NA other downstream 1482174 74287778 ~ 74288138 (+)
G545485 NA other downstream 2432196 75237800 ~ 75238164 (+)
G545601 NA other downstream 2616257 75421861 ~ 75422752 (+)

Expression


Co-expression Network