Gene
RNA
| Item | Value |
|---|---|
| gene id | G543225 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72810903 ~ 72815653 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| synaptotagmin-7-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU615146 | True | 4723 | lncRNA | 0.49 | 2 | 72810903 | 72815653 |
72,810,000
72,811,000
72,812,000
72,813,000
72,814,000
72,815,000
72,816,000
72,817,000
72,818,000
72,819,000
72,820,000
72,821,000
72,822,000
72,823,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526964 | LOC106587485 | coding | downstream | 281527 | 72504884 ~ 72529376 (-) |
| LOC110526521 | LOC106587483 | coding | downstream | 442228 | 72341021 ~ 72368675 (-) |
| LOC110526519 | s39ad | coding | downstream | 543171 | 72256687 ~ 72267732 (-) |
| LOC110526518 | LOC106587479 | coding | downstream | 559491 | 72244467 ~ 72251412 (-) |
| LOC110526513 | LOC106587475 | coding | downstream | 656467 | 72151010 ~ 72154436 (-) |
| LOC110526534 | sdhaf2 | coding | upstream | 7585 | 72823238 ~ 72826687 (-) |
| rpb10 | NA | coding | upstream | 14828 | 72830481 ~ 72831878 (-) |
| LOC110526535 | NA | coding | upstream | 17617 | 72833270 ~ 72837247 (-) |
| LOC110526538 | LOC106587508 | coding | upstream | 91921 | 72907574 ~ 72933603 (-) |
| LOC110526540 | LOC106587507 | coding | upstream | 186492 | 73002145 ~ 73007919 (-) |
| G543223 | NA | non-coding | downstream | 1266 | 72809049 ~ 72809637 (-) |
| G543222 | LOC106587514 | non-coding | downstream | 1867 | 72808389 ~ 72809036 (-) |
| G543221 | NA | non-coding | downstream | 5612 | 72805069 ~ 72805291 (-) |
| G543220 | NA | non-coding | downstream | 5951 | 72804730 ~ 72804952 (-) |
| G543201 | NA | non-coding | downstream | 33942 | 72776514 ~ 72776961 (-) |
| G543219 | NA | non-coding | upstream | 4181 | 72819834 ~ 72821473 (-) |
| G543251 | ext2 | non-coding | upstream | 68764 | 72884417 ~ 72885653 (-) |
| G543240 | NA | non-coding | upstream | 71738 | 72887391 ~ 72887933 (-) |
| G543238 | ext2 | non-coding | upstream | 72862 | 72888515 ~ 72894947 (-) |
| G543224 | LOC106587514 | other | downstream | 731 | 72809777 ~ 72810172 (-) |
| G543091 | NA | other | downstream | 89085 | 72600275 ~ 72721818 (-) |
| G543092 | NA | other | downstream | 144190 | 72659456 ~ 72666713 (-) |
| G541798 | NA | other | downstream | 1197063 | 71609531 ~ 71613840 (-) |
| LOC110526488 | LOC106562298 | other | downstream | 2145042 | 70623828 ~ 70666213 (-) |
| G543313 | LOC106587506 | other | upstream | 181875 | 72997528 ~ 73020000 (-) |
| G543334 | NA | other | upstream | 213120 | 73028773 ~ 73029102 (-) |
| G543823 | NA | other | upstream | 746706 | 73562359 ~ 73562863 (-) |
| sinhcafl | fa60a | other | upstream | 1453590 | 74269202 ~ 74274416 (-) |
