Gene
RNA
| Item | Value |
|---|---|
| gene id | G542905 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 72819924 ~ 72820971 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU614784 | True | 1048 | lncRNA | 0.43 | 1 | 72819924 | 72820971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526531 | LOC106587514 | coding | upstream | 4204 | 72708156 ~ 72815720 (+) |
| LOC110526530 | LOC106587515 | coding | upstream | 117681 | 72691788 ~ 72702243 (+) |
| LOC118964931 | saa | coding | upstream | 129267 | 72689343 ~ 72690657 (+) |
| LOC110518525 | LOC106587448 | coding | upstream | 147246 | 72667865 ~ 72672678 (+) |
| saa | saa | coding | upstream | 153214 | 72665460 ~ 72666872 (+) |
| LOC110526532 | LOC106562322 | coding | downstream | 5626 | 72826597 ~ 72830480 (+) |
| LOC110526536 | LOC106562320 | coding | downstream | 11013 | 72831984 ~ 72884038 (+) |
| LOC110526537 | ext2 | coding | downstream | 63506 | 72884477 ~ 72907006 (+) |
| LOC110526539 | LOC106587506 | coding | downstream | 169035 | 72990006 ~ 73001543 (+) |
| LOC110525049 | LOC106587503 | coding | downstream | 190746 | 73011717 ~ 73013424 (+) |
| G542902 | NA | non-coding | upstream | 14320 | 72805403 ~ 72805604 (+) |
| G542901 | NA | non-coding | upstream | 15739 | 72803808 ~ 72804185 (+) |
| G542898 | NA | non-coding | upstream | 26228 | 72793218 ~ 72793696 (+) |
| G542894 | NA | non-coding | upstream | 39710 | 72779035 ~ 72780214 (+) |
| G542891 | NA | non-coding | upstream | 52601 | 72766911 ~ 72767323 (+) |
| G542843 | sdhaf2 | non-coding | downstream | 2265 | 72823236 ~ 72826432 (+) |
| G542906 | NA | non-coding | downstream | 11533 | 72832504 ~ 72832731 (+) |
| G542916 | NA | non-coding | downstream | 30677 | 72851648 ~ 72852100 (+) |
| G542994 | NA | non-coding | downstream | 166285 | 72987256 ~ 72987462 (+) |
| G543009 | NA | non-coding | downstream | 207229 | 73028200 ~ 73028554 (+) |
| G542890 | NA | other | upstream | 53073 | 72765681 ~ 72766851 (+) |
| G542100 | LOC106587475 | other | upstream | 667530 | 72151020 ~ 72152394 (+) |
| G542053 | NA | other | upstream | 717450 | 72101380 ~ 72102474 (+) |
| G541903 | NA | other | upstream | 1015462 | 71800040 ~ 71804462 (+) |
| LOC110526543 | LOC106587517 | other | downstream | 217650 | 73037953 ~ 73182742 (+) |
| LOC100136290 | sox6 | other | downstream | 551834 | 73190979 ~ 73392251 (+) |
| G544565 | NA | other | downstream | 1466807 | 74287778 ~ 74288138 (+) |
| G545485 | NA | other | downstream | 2416829 | 75237800 ~ 75238164 (+) |
| G545601 | NA | other | downstream | 2600890 | 75421861 ~ 75422752 (+) |
