G542994


Basic Information

Item Value
gene id G542994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 72987256 ~ 72987462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU614876
aacagaaataccttatttgcataagtattcagaacctttgctatgagactcaaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctccaacttgattggagtccacctgaggtaacttaaattgattggacatgatttggaaaggcacacccctgtctATTTAagatcccatagttgacagtgcatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU614876 True 207 lncRNA 0.40 1 72987256 72987462

Neighbor

gene id symbol gene type direction distance location
LOC110526537 ext2 coding upstream 80250 72884477 ~ 72907006 (+)
LOC110526536 LOC106562320 coding upstream 103218 72831984 ~ 72884038 (+)
LOC110526532 LOC106562322 coding upstream 156776 72826597 ~ 72830480 (+)
LOC110526531 LOC106587514 coding upstream 171536 72708156 ~ 72815720 (+)
LOC110526530 LOC106587515 coding upstream 285013 72691788 ~ 72702243 (+)
LOC110526539 LOC106587506 coding downstream 2544 72990006 ~ 73001543 (+)
LOC110525049 LOC106587503 coding downstream 24255 73011717 ~ 73013424 (+)
LOC110526541 rps13 coding downstream 28751 73016213 ~ 73020001 (+)
LOC118965112 NA coding downstream 29946 73017408 ~ 73017539 (+)
LOC118965096 NA coding downstream 31593 73019055 ~ 73019257 (+)
G542916 NA non-coding upstream 135156 72851648 ~ 72852100 (+)
G542906 NA non-coding upstream 154525 72832504 ~ 72832731 (+)
G542843 sdhaf2 non-coding upstream 160824 72823236 ~ 72826432 (+)
G542905 NA non-coding upstream 166285 72819924 ~ 72820971 (+)
G542902 NA non-coding upstream 181652 72805403 ~ 72805604 (+)
G543009 NA non-coding downstream 40738 73028200 ~ 73028554 (+)
G543012 NA non-coding downstream 44065 73031527 ~ 73031864 (+)
G543013 NA non-coding downstream 44654 73032116 ~ 73032334 (+)
G543014 NA non-coding downstream 45049 73032511 ~ 73032760 (+)
G543016 NA non-coding downstream 47652 73035114 ~ 73035455 (+)
G542890 NA other upstream 220405 72765681 ~ 72766851 (+)
saa saa other upstream 320384 72665460 ~ 72666872 (+)
G542100 LOC106587475 other upstream 834862 72151020 ~ 72152394 (+)
G542053 NA other upstream 884782 72101380 ~ 72102474 (+)
G541903 NA other upstream 1182794 71800040 ~ 71804462 (+)
LOC110526543 LOC106587517 other downstream 51159 73037953 ~ 73182742 (+)
LOC100136290 sox6 other downstream 385343 73190979 ~ 73392251 (+)
G544565 NA other downstream 1300316 74287778 ~ 74288138 (+)
G545485 NA other downstream 2250338 75237800 ~ 75238164 (+)
G545601 NA other downstream 2434399 75421861 ~ 75422752 (+)

Expression


Co-expression Network